Feature identity
- Identifier
- PaHa10g12040.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 852 bp
- Genomic location
- 10:36,710,355–36,711,442
- Strand
- +
Hass · mRNA
PaHa10g12040.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 852
- bp
- 10:36,710,355–36,711,442
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g12040
- eggNOG
- Preferred name: C1 | Seed ortholog: 337451.A0A3S3NIQ2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|DqE-36, Myb_DNA-binding@35493|JLw-42
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006633 fatty acid biosynthetic process; GO:0006970 response to osmotic stress; GO:0010023 proanthocyanidin biosynthetic process
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g12040.1-protein
derives_frommRNAPaHa10g12040.1
mRNAPaHa10g12040.1
part_ofgenePaHa10g12040
CDS
part_ofPaHa10g12040.1-CDS-10-1787993825:36710355..36710490mRNAPaHa10g12040.1
CDS
part_ofPaHa10g12040.1-CDS-10-1787993825:36710587..36710716mRNAPaHa10g12040.1
CDS
part_ofPaHa10g12040.1-CDS-10-1787993825:36710857..36711442mRNAPaHa10g12040.1
exon
part_ofPaHa10g12040.1-exon-10-1787993825:36710355..36710490mRNAPaHa10g12040.1
exon
part_ofPaHa10g12040.1-exon-10-1787993825:36710587..36710716mRNAPaHa10g12040.1
exon
part_ofPaHa10g12040.1-exon-10-1787993825:36710857..36711442mRNAPaHa10g12040.1
