Feature identity
- Identifier
- PaHa10g11920.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,566 bp
- Genomic location
- 10:36,475,946–36,488,136
- Strand
- −
Hass · mRNA
PaHa10g11920.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,566
- bp
- 10:36,475,946–36,488,136
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g11920
- eggNOG
- Preferred name: NTRC | Seed ortholog: 337451.A0A3S3N113 | COG: COG3118 | eggNOG OG: Pyr_redox_2@131567|BZY-25, Thioredoxin@131567|DT-10
- Gene Ontology
- GO:0004791 thioredoxin-disulfide reductase (NADPH) activity; GO:0005515 protein binding; GO:0005829 cytosol; GO:0008047 enzyme activator activity; GO:0009507 chloroplast; GO:0009570 chloroplast stroma; GO:0010380 regulation of chlorophyll biosynthetic process; GO:0010581 regulation of starch biosynthetic process; GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0042744 hydrogen peroxide catabolic process; GO:0043085 positive regulation of catalytic activity; GO:0045454 cell redox homeostasis
- KEGG
- EC: ec:1.8.1.9 | KO: K00384 | Pathway: 00450 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g11920.1-protein
derives_frommRNAPaHa10g11920.1
mRNAPaHa10g11920.1
part_ofgenePaHa10g11920
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36475946..36476006mRNAPaHa10g11920.1
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36476822..36476952mRNAPaHa10g11920.1
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36481521..36481625mRNAPaHa10g11920.1
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36481756..36481842mRNAPaHa10g11920.1
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36482151..36482258mRNAPaHa10g11920.1
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36483381..36483660mRNAPaHa10g11920.1
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36484345..36484610mRNAPaHa10g11920.1
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36486144..36486249mRNAPaHa10g11920.1
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36486394..36486607mRNAPaHa10g11920.1
CDS
part_ofPaHa10g11920.1-CDS-10-1787993825:36487929..36488136mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36475946..36476006mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36476822..36476952mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36481521..36481625mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36481756..36481842mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36482151..36482258mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36483381..36483660mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36484345..36484610mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36486144..36486249mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36486394..36486607mRNAPaHa10g11920.1
exon
part_ofPaHa10g11920.1-exon-10-1787993825:36487929..36488136mRNAPaHa10g11920.1
