Feature identity
- Identifier
- PaHa10g11670.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,097 bp
- Genomic location
- 10:35,947,520–35,989,644
- Strand
- −
Hass · mRNA
PaHa10g11670.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,097
- bp
- 10:35,947,520–35,989,644
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g11670
- eggNOG
- Preferred name: LACS6 | Seed ortholog: 337451.A0A443PSJ4 | COG: COG0318 | eggNOG OG: AMP-binding_C@131567|DWV-30, AMP-binding_C@2759|dCp-51, AMP-binding|U24XTC@131567, AMP-binding|U24XTC@3398
- Gene Ontology
- GO:0004467 long-chain fatty acid-CoA ligase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005777 peroxisome; GO:0006631 fatty acid metabolic process; GO:0009536 plastid; GO:0009651 response to salt stress; GO:0010193 response to ozone; GO:0102391 decanoate-CoA ligase activity
- KEGG
- EC: ec:6.2.1.3 | KO: K01897 | Pathway: 00061, 00071, 01100, 01212, 04146 | Module: M00086 | BRITE: 00001, 01000, 01004, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g11670.1-protein
derives_frommRNAPaHa10g11670.1
mRNAPaHa10g11670.1
part_ofgenePaHa10g11670
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35947520..35947618mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35947720..35947806mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35947905..35947991mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35962238..35962323mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35962405..35962508mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35965954..35966040mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35966138..35966261mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35967085..35967203mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35967329..35967458mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35970829..35970917mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35971010..35971098mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35971926..35972019mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35972146..35972225mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35972309..35972398mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35975655..35975741mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35975881..35975925mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35984928..35985004mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35985086..35985191mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35985402..35985483mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35985578..35985649mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35987287..35987364mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35987440..35987500mRNAPaHa10g11670.1
CDS
part_ofPaHa10g11670.1-CDS-10-1787993825:35989521..35989644mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35947520..35947618mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35947720..35947806mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35947905..35947991mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35962238..35962323mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35962405..35962508mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35965954..35966040mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35966138..35966261mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35967085..35967203mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35967329..35967458mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35970829..35970917mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35971010..35971098mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35971926..35972019mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35972146..35972225mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35972309..35972398mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35975655..35975741mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35975881..35975925mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35984928..35985004mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35985086..35985191mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35985402..35985483mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35985578..35985649mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35987287..35987364mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35987440..35987500mRNAPaHa10g11670.1
exon
part_ofPaHa10g11670.1-exon-10-1787993825:35989521..35989644mRNAPaHa10g11670.1
