Feature identity
- Identifier
- PaHa10g06490.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,110 bp
- Genomic location
- 10:25,869,738–25,888,830
- Strand
- +
Hass · mRNA
PaHa10g06490.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,110
- bp
- 10:25,869,738–25,888,830
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g06490
- eggNOG
- Preferred name: LOC104604911 | Seed ortholog: 337451.A0A3S3NJL5 | COG: S | eggNOG OG: WD40@131567|xz-17, WD40@2759|Pnf-31
- Gene Ontology
- GO:0001222 transcription corepressor binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005677 chromatin silencing complex; GO:0009409 response to cold; GO:0009793 embryo development ending in seed dormancy; GO:0009908 flower development; GO:0009910 negative regulation of flower development; GO:0009960 endosperm development; GO:0010048 vernalization response; GO:0010231 maintenance of seed dormancy; GO:0031507 heterochromatin formation; GO:0031519 PcG protein complex; GO:0043078 polar nucleus; GO:0045815 transcription initiation-coupled chromatin remodeling; GO:0048316 seed development; GO:0090696 post-embryonic plant organ development; GO:0141044 epigenetic programming in the endosperm; GO:2000014 regulation of endosperm development
- KEGG
- KO: K11462 | Pathway: 03083 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g06490.1-protein
derives_frommRNAPaHa10g06490.1
mRNAPaHa10g06490.1
part_ofgenePaHa10g06490
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25869738..25869914mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25871338..25871403mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25871513..25871635mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25873707..25873787mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25873870..25873962mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25874080..25874155mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25874337..25874416mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25874558..25874629mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25886458..25886517mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25886695..25886791mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25887399..25887462mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25887576..25887635mRNAPaHa10g06490.1
CDS
part_ofPaHa10g06490.1-CDS-10-1787993825:25888770..25888830mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25869738..25869914mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25871338..25871403mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25871513..25871635mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25873707..25873787mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25873870..25873962mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25874080..25874155mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25874337..25874416mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25874558..25874629mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25886458..25886517mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25886695..25886791mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25887399..25887462mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25887576..25887635mRNAPaHa10g06490.1
exon
part_ofPaHa10g06490.1-exon-10-1787993825:25888770..25888830mRNAPaHa10g06490.1
