Feature identity
- Identifier
- PaHa10g06100.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 207 bp
- Genomic location
- 10:24,537,463–24,538,065
- Strand
- +
Hass · mRNA
PaHa10g06100.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 207
- bp
- 10:24,537,463–24,538,065
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g06100
- eggNOG
- Preferred name: LOC107766041 | Seed ortholog: 79200.A0A166IXG9 | COG: S | eggNOG OG: Myb_CC_LHEQLE@131567|A-1*, Myb_CC_LHEQLE@3193|Z-8, Myb_CC_LHEQLE@33090|S-7, Myb_CC_LHEQLE@3398|i-9
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0006355 regulation of DNA-templated transcription; GO:2000762 regulation of phenylpropanoid metabolic process
- KEGG
- EC: ec:6.3.4.5 | KO: K01940 | Pathway: 00220, 00250, 01100, 01110, 01230 | Module: M00029, M00844, M00845, M00978 | BRITE: 00001, 01000, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g06100.1-protein
derives_frommRNAPaHa10g06100.1
mRNAPaHa10g06100.1
part_ofgenePaHa10g06100
CDS
part_ofPaHa10g06100.1-CDS-10-1787993825:24537463..24537477mRNAPaHa10g06100.1
CDS
part_ofPaHa10g06100.1-CDS-10-1787993825:24537874..24538065mRNAPaHa10g06100.1
exon
part_ofPaHa10g06100.1-exon-10-1787993825:24537463..24537477mRNAPaHa10g06100.1
exon
part_ofPaHa10g06100.1-exon-10-1787993825:24537874..24538065mRNAPaHa10g06100.1
