Feature identity
- Identifier
- PaHa10g03240.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 846 bp
- Genomic location
- 10:9,448,860–9,482,052
- Strand
- −
Hass · mRNA
PaHa10g03240.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 846
- bp
- 10:9,448,860–9,482,052
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g03240
- eggNOG
- Preferred name: UBA1C | Seed ortholog: 337451.A0A3S3NIE0 | COG: S | eggNOG OG: zf-LYAR@2759|A-1, zf-met@131567|B-2
- Gene Ontology
- GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0042802 identical protein binding; GO:0140297 DNA-binding transcription factor binding; GO:0140416 transcription regulator inhibitor activity
- KEGG
- KO: K15263 | Pathway: 03040 | BRITE: 00001, 03000, 03009
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g03240.1-protein
derives_frommRNAPaHa10g03240.1
mRNAPaHa10g03240.1
part_ofgenePaHa10g03240
CDS
part_ofPaHa10g03240.1-CDS-10-1787993825:9448860..9448937mRNAPaHa10g03240.1
CDS
part_ofPaHa10g03240.1-CDS-10-1787993825:9449292..9449332mRNAPaHa10g03240.1
CDS
part_ofPaHa10g03240.1-CDS-10-1787993825:9449400..9449410mRNAPaHa10g03240.1
CDS
part_ofPaHa10g03240.1-CDS-10-1787993825:9450110..9450219mRNAPaHa10g03240.1
CDS
part_ofPaHa10g03240.1-CDS-10-1787993825:9450315..9450428mRNAPaHa10g03240.1
CDS
part_ofPaHa10g03240.1-CDS-10-1787993825:9457039..9457360mRNAPaHa10g03240.1
CDS
part_ofPaHa10g03240.1-CDS-10-1787993825:9457457..9457561mRNAPaHa10g03240.1
CDS
part_ofPaHa10g03240.1-CDS-10-1787993825:9475315..9475333mRNAPaHa10g03240.1
CDS
part_ofPaHa10g03240.1-CDS-10-1787993825:9482007..9482052mRNAPaHa10g03240.1
exon
part_ofPaHa10g03240.1-exon-10-1787993825:9448860..9448937mRNAPaHa10g03240.1
exon
part_ofPaHa10g03240.1-exon-10-1787993825:9449292..9449332mRNAPaHa10g03240.1
exon
part_ofPaHa10g03240.1-exon-10-1787993825:9449400..9449410mRNAPaHa10g03240.1
exon
part_ofPaHa10g03240.1-exon-10-1787993825:9450110..9450219mRNAPaHa10g03240.1
exon
part_ofPaHa10g03240.1-exon-10-1787993825:9450315..9450428mRNAPaHa10g03240.1
exon
part_ofPaHa10g03240.1-exon-10-1787993825:9457039..9457360mRNAPaHa10g03240.1
exon
part_ofPaHa10g03240.1-exon-10-1787993825:9457457..9457561mRNAPaHa10g03240.1
exon
part_ofPaHa10g03240.1-exon-10-1787993825:9475315..9475333mRNAPaHa10g03240.1
exon
part_ofPaHa10g03240.1-exon-10-1787993825:9482007..9482052mRNAPaHa10g03240.1
