Feature identity
- Identifier
- PaHa10g02880.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,166 bp
- Genomic location
- 10:8,119,849–8,124,477
- Strand
- −
Hass · mRNA
PaHa10g02880.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,166
- bp
- 10:8,119,849–8,124,477
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g02880
- eggNOG
- Preferred name: ARF9 | Seed ortholog: 337451.A0A443PRH6 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|qd-19, AUX_IAA@3398|Ami-25, Auxin_resp@131567|A-1*, Auxin_resp@2759|N-4, Auxin_resp@3398|BU-10, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BlP-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009506 plasmodesma; GO:0042802 identical protein binding
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g02880.1-protein
derives_frommRNAPaHa10g02880.1
mRNAPaHa10g02880.1
part_ofgenePaHa10g02880
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8119849..8119990mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8120073..8120260mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8120688..8121352mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8121448..8121601mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8121719..8121791mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8121903..8122016mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8122102..8122266mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8122359..8122449mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8123136..8123220mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8123308..8123460mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8123576..8123632mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8124038..8124133mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8124203..8124324mRNAPaHa10g02880.1
CDS
part_ofPaHa10g02880.1-CDS-10-1787993825:8124417..8124477mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8119849..8119990mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8120073..8120260mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8120688..8121352mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8121448..8121601mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8121719..8121791mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8121903..8122016mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8122102..8122266mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8122359..8122449mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8123136..8123220mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8123308..8123460mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8123576..8123632mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8124038..8124133mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8124203..8124324mRNAPaHa10g02880.1
exon
part_ofPaHa10g02880.1-exon-10-1787993825:8124417..8124477mRNAPaHa10g02880.1
