Feature identity
- Identifier
- PaHa10g02660.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 597 bp
- Genomic location
- 10:7,804,735–7,826,971
- Strand
- −
Hass · mRNA
PaHa10g02660.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 597
- bp
- 10:7,804,735–7,826,971
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g02660
- eggNOG
- Preferred name: LOC103700268 | Seed ortholog: 337451.A0A3S3N6J6 | COG: COG4539 | eggNOG OG: Mpo1-like@131567|C-2, Mpo1-like@1437183|as-20, Mpo1-like@3193|Hr-13
- Gene Ontology
- GO:0001561 fatty acid alpha-oxidation; GO:0003674 molecular_function; GO:0005575 cellular_component; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0008150 biological_process; GO:0046521 sphingoid catabolic process; GO:0102672 fatty acid alpha-dioxygenase activity
- KEGG
- EC: ec:1.14.18.12, ec:3.4.11.26 | KO: K18573, K24121 | BRITE: 00001, 01000, 01002
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g02660.1-protein
derives_frommRNAPaHa10g02660.1
mRNAPaHa10g02660.1
part_ofgenePaHa10g02660
CDS
part_ofPaHa10g02660.1-CDS-10-1787993825:7804735..7804851mRNAPaHa10g02660.1
CDS
part_ofPaHa10g02660.1-CDS-10-1787993825:7804930..7805001mRNAPaHa10g02660.1
CDS
part_ofPaHa10g02660.1-CDS-10-1787993825:7805116..7805178mRNAPaHa10g02660.1
CDS
part_ofPaHa10g02660.1-CDS-10-1787993825:7826627..7826971mRNAPaHa10g02660.1
exon
part_ofPaHa10g02660.1-exon-10-1787993825:7804735..7804851mRNAPaHa10g02660.1
exon
part_ofPaHa10g02660.1-exon-10-1787993825:7804930..7805001mRNAPaHa10g02660.1
exon
part_ofPaHa10g02660.1-exon-10-1787993825:7805116..7805178mRNAPaHa10g02660.1
exon
part_ofPaHa10g02660.1-exon-10-1787993825:7826627..7826971mRNAPaHa10g02660.1
