Feature identity
- Identifier
- PaHa10g02030.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,016 bp
- Genomic location
- 10:6,014,347–6,051,451
- Strand
- −
Hass · mRNA
PaHa10g02030.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,016
- bp
- 10:6,014,347–6,051,451
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g02030
- eggNOG
- Preferred name: LOC110786416 | Seed ortholog: 337451.A0A3S3NE38 | eggNOG OG: AMP-binding|6RGWO0@131567, AMP-binding|6RGWO0@1437183, AMP-binding|6RGWO0@3193, AMP-binding|6RGWO0@3398
- Gene Ontology
- GO:0004467 long-chain fatty acid-CoA ligase activity; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005794 Golgi apparatus; GO:0005886 plasma membrane; GO:0006631 fatty acid metabolic process; GO:0006633 fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0009556 microsporogenesis; GO:0048653 anther development; GO:0080024 indolebutyric acid metabolic process
- KEGG
- EC: ec:6.2.1.3 | KO: K01897 | Pathway: 00061, 00071, 01100, 01212, 04146 | Module: M00086 | BRITE: 00001, 01000, 01004, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g02030.1-protein
derives_frommRNAPaHa10g02030.1
mRNAPaHa10g02030.1
part_ofgenePaHa10g02030
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6014347..6014391mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6017313..6017432mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6017538..6017720mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6021029..6021168mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6021666..6021911mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6022021..6022138mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6022251..6022326mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6025724..6025790mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6034167..6034254mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6034332..6034442mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6034631..6034798mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6035915..6036009mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6036092..6036131mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6036646..6036722mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6037060..6037108mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6037193..6037249mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6038385..6038474mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6038571..6038634mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6044340..6044378mRNAPaHa10g02030.1
CDS
part_ofPaHa10g02030.1-CDS-10-1787993825:6051309..6051451mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6014347..6014391mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6017313..6017432mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6017538..6017720mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6021029..6021168mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6021666..6021911mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6022021..6022138mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6022251..6022326mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6025724..6025790mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6034167..6034254mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6034332..6034442mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6034631..6034798mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6035915..6036009mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6036092..6036131mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6036646..6036722mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6037060..6037108mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6037193..6037249mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6038385..6038474mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6038571..6038634mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6044340..6044378mRNAPaHa10g02030.1
exon
part_ofPaHa10g02030.1-exon-10-1787993825:6051309..6051451mRNAPaHa10g02030.1
