Feature identity
- Identifier
- PaHa10g01010.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 309 bp
- Genomic location
- 10:3,324,089–3,324,397
- Strand
- +
Hass · mRNA
PaHa10g01010.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 309
- bp
- 10:3,324,089–3,324,397
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g01010
- eggNOG
- Preferred name: BHLH13 | Seed ortholog: 337451.A0A3S3NS84 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|EiP-29, HLH@33090|AAF-17, HLH@3398|HWM-32, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|AFV-24, bHLH-MYC_N@33090|Y-5, bHLH-MYC_N@3398|AMN-26
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009611 response to wounding; GO:0009737 response to abscisic acid; GO:0010629 negative regulation of gene expression; GO:0031347 regulation of defense response; GO:2000022 regulation of jasmonic acid mediated signaling pathway
- KEGG
- KO: K13422 | Pathway: 04016, 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g01010.1-protein
derives_frommRNAPaHa10g01010.1
mRNAPaHa10g01010.1
part_ofgenePaHa10g01010
CDS
part_ofPaHa10g01010.1-CDS-10-1787993825:3324089..3324397mRNAPaHa10g01010.1
exon
part_ofPaHa10g01010.1-exon-10-1787993825:3324089..3324397mRNAPaHa10g01010.1
