Feature identity
- Identifier
- PaHa10g00740.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,011 bp
- Genomic location
- 10:2,819,409–2,821,323
- Strand
- −
Hass · mRNA
PaHa10g00740.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,011
- bp
- 10:2,819,409–2,821,323
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g00740
- eggNOG
- Preferred name: SPCH | Seed ortholog: 337451.A0A443PQX5 | COG: S | eggNOG OG: HLH@131567|OW-12, HLH@3193|pN-16, HLH@3398|AAM-17, HLH@35493|gX-15
- Gene Ontology
- GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0006970 response to osmotic stress; GO:0010374 stomatal complex development; GO:0047484 regulation of response to osmotic stress; GO:0090547 response to low humidity; GO:2000038 regulation of stomatal complex development
- KEGG
- KO: K20558 | Pathway: 04016 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g00740.1-protein
derives_frommRNAPaHa10g00740.1
mRNAPaHa10g00740.1
part_ofgenePaHa10g00740
CDS
part_ofPaHa10g00740.1-CDS-10-1787993825:2819409..2819474mRNAPaHa10g00740.1
CDS
part_ofPaHa10g00740.1-CDS-10-1787993825:2820126..2820656mRNAPaHa10g00740.1
CDS
part_ofPaHa10g00740.1-CDS-10-1787993825:2820910..2821323mRNAPaHa10g00740.1
exon
part_ofPaHa10g00740.1-exon-10-1787993825:2819409..2819474mRNAPaHa10g00740.1
exon
part_ofPaHa10g00740.1-exon-10-1787993825:2820126..2820656mRNAPaHa10g00740.1
exon
part_ofPaHa10g00740.1-exon-10-1787993825:2820910..2821323mRNAPaHa10g00740.1
