Feature identity
- Identifier
- PaHa10g00660.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 264 bp
- Genomic location
- 10:2,536,958–2,541,776
- Strand
- −
Hass · mRNA
PaHa10g00660.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 264
- bp
- 10:2,536,958–2,541,776
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g00660
- eggNOG
- Preferred name: TRY | Seed ortholog: 337451.A0A443PQX8 | COG: S | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@1437183|FZt-38, Myb_DNA-binding@35493|Ajp-29
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0010091 trichome branching; GO:0010154 fruit development; GO:0045892 negative regulation of DNA-templated transcription; GO:0048629 trichome patterning; GO:0080147 root hair cell development; GO:1900032 regulation of trichome patterning; GO:1900033 negative regulation of trichome patterning; GO:2000039 regulation of trichome morphogenesis
- KEGG
- KO: K09422 | Pathway: 03040, 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g00660.1-protein
derives_frommRNAPaHa10g00660.1
mRNAPaHa10g00660.1
part_ofgenePaHa10g00660
CDS
part_ofPaHa10g00660.1-CDS-10-1787993825:2536958..2537078mRNAPaHa10g00660.1
CDS
part_ofPaHa10g00660.1-CDS-10-1787993825:2541541..2541628mRNAPaHa10g00660.1
CDS
part_ofPaHa10g00660.1-CDS-10-1787993825:2541722..2541776mRNAPaHa10g00660.1
exon
part_ofPaHa10g00660.1-exon-10-1787993825:2536958..2537078mRNAPaHa10g00660.1
exon
part_ofPaHa10g00660.1-exon-10-1787993825:2541541..2541628mRNAPaHa10g00660.1
exon
part_ofPaHa10g00660.1-exon-10-1787993825:2541722..2541776mRNAPaHa10g00660.1
