Feature identity
- Identifier
- PaHa09g22090.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 411 bp
- Genomic location
- 9:51,920,086–51,922,549
- Strand
- −
Hass · mRNA
PaHa09g22090.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 411
- bp
- 9:51,920,086–51,922,549
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g22090
- eggNOG
- Preferred name: LOC104605220 | Seed ortholog: 337451.A0A443PYZ1 | COG: S | eggNOG OG: HipN@2759|A-1, HipN@3398|BR-12, Thioredoxin@131567|WD-15, Thioredoxin@2759|CZY-24!, Thioredoxin@3193|Hdw-30, Thioredoxin@58023|Ipa-31
- Gene Ontology
- GO:0000118 histone deacetylase complex; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006457 protein folding; GO:0010286 heat acclimation; GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0030544 Hsp70 protein binding; GO:0042802 identical protein binding; GO:0051259 protein complex oligomerization
- KEGG
- KO: K09560 | BRITE: 00001, 03110, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g22090.1-protein
derives_frommRNAPaHa09g22090.1
mRNAPaHa09g22090.1
part_ofgenePaHa09g22090
CDS
part_ofPaHa09g22090.1-CDS-9-1787993825:51920086..51920184mRNAPaHa09g22090.1
CDS
part_ofPaHa09g22090.1-CDS-9-1787993825:51920879..51921046mRNAPaHa09g22090.1
CDS
part_ofPaHa09g22090.1-CDS-9-1787993825:51922335..51922368mRNAPaHa09g22090.1
CDS
part_ofPaHa09g22090.1-CDS-9-1787993825:51922440..51922549mRNAPaHa09g22090.1
exon
part_ofPaHa09g22090.1-exon-9-1787993825:51920086..51920184mRNAPaHa09g22090.1
exon
part_ofPaHa09g22090.1-exon-9-1787993825:51920879..51921046mRNAPaHa09g22090.1
exon
part_ofPaHa09g22090.1-exon-9-1787993825:51922335..51922368mRNAPaHa09g22090.1
exon
part_ofPaHa09g22090.1-exon-9-1787993825:51922440..51922549mRNAPaHa09g22090.1
