Feature identity
- Identifier
- PaHa09g20820.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 855 bp
- Genomic location
- 9:50,340,575–50,341,698
- Strand
- +
Hass · mRNA
PaHa09g20820.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 855
- bp
- 9:50,340,575–50,341,698
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g20820
- eggNOG
- Preferred name: C1 | Seed ortholog: 337451.A0A3S3NIQ2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|DqE-36, Myb_DNA-binding@35493|JLw-42
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006633 fatty acid biosynthetic process; GO:0006970 response to osmotic stress; GO:0010023 proanthocyanidin biosynthetic process
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g20820.1-protein
derives_frommRNAPaHa09g20820.1
mRNAPaHa09g20820.1
part_ofgenePaHa09g20820
CDS
part_ofPaHa09g20820.1-CDS-9-1787993825:50340575..50340710mRNAPaHa09g20820.1
CDS
part_ofPaHa09g20820.1-CDS-9-1787993825:50340840..50340969mRNAPaHa09g20820.1
CDS
part_ofPaHa09g20820.1-CDS-9-1787993825:50341110..50341698mRNAPaHa09g20820.1
exon
part_ofPaHa09g20820.1-exon-9-1787993825:50340575..50340710mRNAPaHa09g20820.1
exon
part_ofPaHa09g20820.1-exon-9-1787993825:50340840..50340969mRNAPaHa09g20820.1
exon
part_ofPaHa09g20820.1-exon-9-1787993825:50341110..50341698mRNAPaHa09g20820.1
