Feature identity
- Identifier
- PaHa09g20680.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 765 bp
- Genomic location
- 9:50,125,608–50,140,275
- Strand
- +
Hass · mRNA
PaHa09g20680.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 765
- bp
- 9:50,125,608–50,140,275
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g20680
- eggNOG
- Preferred name: AGL65 | Seed ortholog: 337451.A0A3S3N4Q2 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|AON-23, SRF-TF@58023|ai-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0010152 pollen maturation; GO:0080092 regulation of pollen tube growth
- KEGG
- KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g20680.1-protein
derives_frommRNAPaHa09g20680.1
mRNAPaHa09g20680.1
part_ofgenePaHa09g20680
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50125608..50125792mRNAPaHa09g20680.1
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50131857..50131916mRNAPaHa09g20680.1
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50132016..50132034mRNAPaHa09g20680.1
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50132137..50132201mRNAPaHa09g20680.1
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50132293..50132311mRNAPaHa09g20680.1
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50132593..50132654mRNAPaHa09g20680.1
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50133974..50134070mRNAPaHa09g20680.1
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50134215..50134256mRNAPaHa09g20680.1
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50139746..50139834mRNAPaHa09g20680.1
CDS
part_ofPaHa09g20680.1-CDS-9-1787993825:50140149..50140275mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50125608..50125792mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50131857..50131916mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50132016..50132034mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50132137..50132201mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50132293..50132311mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50132593..50132654mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50133974..50134070mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50134215..50134256mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50139746..50139834mRNAPaHa09g20680.1
exon
part_ofPaHa09g20680.1-exon-9-1787993825:50140149..50140275mRNAPaHa09g20680.1
