Feature identity
- Identifier
- PaHa09g20270.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,342 bp
- Genomic location
- 9:49,562,736–49,572,202
- Strand
- +
Hass · mRNA
PaHa09g20270.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,342
- bp
- 9:49,562,736–49,572,202
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g20270
- eggNOG
- Preferred name: ARF19 | Seed ortholog: 337451.A0A3S3NWK5 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xV-20, AUX_IAA@3398|ANJ-22, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|AZ-8, Auxin_resp@3398|FS-13, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqT-23, B3@33090|Id-12, B3@3398|Bkp-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009630 gravitropism; GO:0009638 phototropism; GO:0009723 response to ethylene; GO:0009733 response to auxin; GO:0009785 blue light signaling pathway; GO:0010311 lateral root formation; GO:0040008 regulation of growth; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048366 leaf development; GO:0048527 lateral root development; GO:1990110 callus formation
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g20270.1-protein
derives_frommRNAPaHa09g20270.1
mRNAPaHa09g20270.1
part_ofgenePaHa09g20270
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49562736..49562781mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49564308..49564420mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49564535..49564630mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49564712..49564768mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49565212..49565367mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49565474..49565558mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49566480..49566570mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49566991..49567155mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49567246..49567441mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49567955..49568093mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49569154..49570979mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49571451..49571641mRNAPaHa09g20270.1
CDS
part_ofPaHa09g20270.1-CDS-9-1787993825:49572022..49572202mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49562736..49562781mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49564308..49564420mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49564535..49564630mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49564712..49564768mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49565212..49565367mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49565474..49565558mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49566480..49566570mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49566991..49567155mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49567246..49567441mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49567955..49568093mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49569154..49570979mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49571451..49571641mRNAPaHa09g20270.1
exon
part_ofPaHa09g20270.1-exon-9-1787993825:49572022..49572202mRNAPaHa09g20270.1
