Feature identity
- Identifier
- PaHa09g19910.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,434 bp
- Genomic location
- 9:49,088,308–49,093,346
- Strand
- −
Hass · mRNA
PaHa09g19910.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,434
- bp
- 9:49,088,308–49,093,346
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g19910
- eggNOG
- Preferred name: LOC104609301 | Seed ortholog: 337451.A0A443PYH3 | COG: COG1047 | eggNOG OG: SAP@131567|Dc-10, SAP@33090|df-18, zf-CCCH_4@131567|A-1*, zf-CCCH_4@2759|Am-7
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0019221 cytokine-mediated signaling pathway; GO:0043547 positive regulation of GTPase activity
- KEGG
- EC: ec:2.3.1.286 | KO: K11416, K13107, K13152, K27706 | Pathway: 00760, 01100 | BRITE: 00001, 01000, 03012, 03036, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g19910.1-protein
derives_frommRNAPaHa09g19910.1
mRNAPaHa09g19910.1
part_ofgenePaHa09g19910
CDS
part_ofPaHa09g19910.1-CDS-9-1787993825:49088308..49088878mRNAPaHa09g19910.1
CDS
part_ofPaHa09g19910.1-CDS-9-1787993825:49089980..49090107mRNAPaHa09g19910.1
CDS
part_ofPaHa09g19910.1-CDS-9-1787993825:49090197..49090295mRNAPaHa09g19910.1
CDS
part_ofPaHa09g19910.1-CDS-9-1787993825:49090789..49090900mRNAPaHa09g19910.1
CDS
part_ofPaHa09g19910.1-CDS-9-1787993825:49091148..49091199mRNAPaHa09g19910.1
CDS
part_ofPaHa09g19910.1-CDS-9-1787993825:49091312..49091373mRNAPaHa09g19910.1
CDS
part_ofPaHa09g19910.1-CDS-9-1787993825:49092186..49092300mRNAPaHa09g19910.1
CDS
part_ofPaHa09g19910.1-CDS-9-1787993825:49092919..49093037mRNAPaHa09g19910.1
CDS
part_ofPaHa09g19910.1-CDS-9-1787993825:49093171..49093346mRNAPaHa09g19910.1
exon
part_ofPaHa09g19910.1-exon-9-1787993825:49088308..49088878mRNAPaHa09g19910.1
exon
part_ofPaHa09g19910.1-exon-9-1787993825:49089980..49090107mRNAPaHa09g19910.1
exon
part_ofPaHa09g19910.1-exon-9-1787993825:49090197..49090295mRNAPaHa09g19910.1
exon
part_ofPaHa09g19910.1-exon-9-1787993825:49090789..49090900mRNAPaHa09g19910.1
exon
part_ofPaHa09g19910.1-exon-9-1787993825:49091148..49091199mRNAPaHa09g19910.1
exon
part_ofPaHa09g19910.1-exon-9-1787993825:49091312..49091373mRNAPaHa09g19910.1
exon
part_ofPaHa09g19910.1-exon-9-1787993825:49092186..49092300mRNAPaHa09g19910.1
exon
part_ofPaHa09g19910.1-exon-9-1787993825:49092919..49093037mRNAPaHa09g19910.1
exon
part_ofPaHa09g19910.1-exon-9-1787993825:49093171..49093346mRNAPaHa09g19910.1
