Feature identity
- Identifier
- PaHa09g18790.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,184 bp
- Genomic location
- 9:47,433,287–47,439,445
- Strand
- +
Hass · mRNA
PaHa09g18790.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,184
- bp
- 9:47,433,287–47,439,445
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g18790
- eggNOG
- Preferred name: WRKY2 | Seed ortholog: 337451.A0A443PY91 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Uo-17, WRKY@33090|AiE-26
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009555 pollen development; GO:0009846 pollen germination; GO:0009942 longitudinal axis specification; GO:0030010 establishment of cell polarity
- KEGG
- KO: K18835 | Pathway: 04626 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g18790.1-protein
derives_frommRNAPaHa09g18790.1
mRNAPaHa09g18790.1
part_ofgenePaHa09g18790
CDS
part_ofPaHa09g18790.1-CDS-9-1787993825:47433287..47433754mRNAPaHa09g18790.1
CDS
part_ofPaHa09g18790.1-CDS-9-1787993825:47434863..47435039mRNAPaHa09g18790.1
CDS
part_ofPaHa09g18790.1-CDS-9-1787993825:47436214..47437034mRNAPaHa09g18790.1
CDS
part_ofPaHa09g18790.1-CDS-9-1787993825:47437172..47437330mRNAPaHa09g18790.1
CDS
part_ofPaHa09g18790.1-CDS-9-1787993825:47438887..47439445mRNAPaHa09g18790.1
exon
part_ofPaHa09g18790.1-exon-9-1787993825:47433287..47433754mRNAPaHa09g18790.1
exon
part_ofPaHa09g18790.1-exon-9-1787993825:47434863..47435039mRNAPaHa09g18790.1
exon
part_ofPaHa09g18790.1-exon-9-1787993825:47436214..47437034mRNAPaHa09g18790.1
exon
part_ofPaHa09g18790.1-exon-9-1787993825:47437172..47437330mRNAPaHa09g18790.1
exon
part_ofPaHa09g18790.1-exon-9-1787993825:47438887..47439445mRNAPaHa09g18790.1
