PaHa09g18100.1

Hass · mRNA

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,263: bp
9:46,500,446–46,508,401: genomic location

Record overview

Feature identity

Identifier: PaHa09g18100.1
Feature type: mRNA
Genome collection: Hass
Organism: Persea americana-Hass
Sequence length: 1,263 bp
Genomic location: 9:46,500,446–46,508,401
Strand: +

Open original Tripal record

Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa09g18100

eggNOG: Preferred name: GBF1 | Seed ortholog: 337451.A0A3S4PWE6 | COG: S | eggNOG OG: MFMR@131221|F-3, MFMR@131567|A-1*, MFMR_assoc@131567|A-1*, MFMR_assoc@3398|E-3, bZIP_1@131567|iz-20, bZIP_1@3193|Elm-36, bZIP_1@33090|DGn-33
Gene Ontology: GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0001756 somitogenesis; GO:0002240 response to molecule of oomycetes origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006006 glucose metabolic process; GO:0006355 regulation of DNA-templated transcription; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006631 fatty acid metabolic process; GO:0006687 glycosphingolipid metabolic process; GO:0006971 hypotonic response; GO:0007283 spermatogenesis; GO:0007613 memory; GO:0007623 circadian rhythm; GO:0008584 male gonad development; GO:0009267 cellular response to starvation; GO:0009626 plant-type hypersensitive response; GO:0009649 entrainment of circadian clock; GO:0009744 response to sucrose; GO:0009845 seed germination; GO:0010581 regulation of starch biosynthetic process; GO:0010976 positive regulation of neuron projection development; GO:0010996 response to auditory stimulus; GO:0014074 response to purine-containing compound; GO:0017148 negative regulation of translation; GO:0030917 midbrain-hindbrain boundary development; GO:0032025 response to cobalt ion; GO:0032922 circadian regulation of gene expression; GO:0033762 response to glucagon; GO:0043066 negative regulation of apoptotic process; GO:0043565 sequence-specific DNA binding; GO:0045600 positive regulation of fat cell differentiation; GO:0045740 positive regulation of DNA replication; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0046889 positive regulation of lipid biosynthetic process; GO:0048384 retinoic acid receptor signaling pathway; GO:0050821 protein stabilization; GO:0051591 response to cAMP; GO:0060028 convergent extension involved in axis elongation; GO:0065003 protein-containing complex assembly; GO:0071215 cellular response to abscisic acid stimulus; GO:0071333 cellular response to glucose stimulus; GO:0080149 sucrose induced translational repression; GO:0098583 learned vocalization behavior; GO:0140928 inhibition of non-skeletal tissue mineralization; GO:0141156 cAMP/PKA signal transduction; GO:2000693 positive regulation of seed maturation
KEGG: KO: K09060 | Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 | BRITE: 00001, 03000

Biological context