Feature identity
- Identifier
- PaHa09g17810.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,271 bp
- Genomic location
- 9:46,049,820–46,055,857
- Strand
- +
Hass · mRNA
PaHa09g17810.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,271
- bp
- 9:46,049,820–46,055,857
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g17810
- eggNOG
- Preferred name: LOC104587389 | Seed ortholog: 337451.A0A443PY10 | COG: S | eggNOG OG: Homeobox_KN@131567|A-1*, Homeobox_KN@1437183|jN-20, Homeobox_KN@2759|C-2!, Homeobox_KN@3398|Ly-15, Homeobox_KN@58023|Dh-11, POX@131567|A-1*, POX@3193|V-7, POX@3398|CX-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009965 leaf morphogenesis; GO:0048363 mucilage pectin metabolic process
- KEGG
- EC: ec:2.1.1.354 | KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 | Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 | BRITE: 00001, 01000, 03000, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g17810.1-protein
derives_frommRNAPaHa09g17810.1
mRNAPaHa09g17810.1
part_ofgenePaHa09g17810
CDS
part_ofPaHa09g17810.1-CDS-9-1787993825:46049820..46051112mRNAPaHa09g17810.1
CDS
part_ofPaHa09g17810.1-CDS-9-1787993825:46052392..46052780mRNAPaHa09g17810.1
CDS
part_ofPaHa09g17810.1-CDS-9-1787993825:46053487..46053547mRNAPaHa09g17810.1
CDS
part_ofPaHa09g17810.1-CDS-9-1787993825:46055330..46055857mRNAPaHa09g17810.1
exon
part_ofPaHa09g17810.1-exon-9-1787993825:46049820..46051112mRNAPaHa09g17810.1
exon
part_ofPaHa09g17810.1-exon-9-1787993825:46052392..46052780mRNAPaHa09g17810.1
exon
part_ofPaHa09g17810.1-exon-9-1787993825:46053487..46053547mRNAPaHa09g17810.1
exon
part_ofPaHa09g17810.1-exon-9-1787993825:46055330..46055857mRNAPaHa09g17810.1
