Feature identity
- Identifier
- PaHa09g17730.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 4,707 bp
- Genomic location
- 9:45,961,955–45,973,317
- Strand
- +
Hass · mRNA
PaHa09g17730.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,707
- bp
- 9:45,961,955–45,973,317
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g17730
- eggNOG
- Preferred name: SUVR5 | Seed ortholog: 337451.A0A3S4PWC7 | COG: S | eggNOG OG: Pre-SET@131567|A-1*, Pre-SET@2759|Y-5!, Pre-SET@35493|Bm-9, SET@131567|BQN-21, SET@2759|DTq-26, zf-C2H2_3rep@2759|A-1, zf-TRM13_CCCH@2759|A-1
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005694 chromosome; GO:0006338 chromatin remodeling; GO:0042054 histone methyltransferase activity; GO:0043565 sequence-specific DNA binding; GO:0045814 negative regulation of gene expression, epigenetic; GO:0140938 histone H3 methyltransferase activity
- KEGG
- EC: ec:2.1.1.225, ec:2.1.1.355, ec:2.1.1.357, ec:2.1.1.362, ec:2.1.1.368, ec:3.2.1.4 | KO: K10511, K11419, K11420, K11429, K11433, K15446, K19357, K24405 | Pathway: 00310, 00500, 01100, 04211 | BRITE: 00001, 01000, 03000, 03016, 03036, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g17730.1-protein
derives_frommRNAPaHa09g17730.1
mRNAPaHa09g17730.1
part_ofgenePaHa09g17730
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45961955..45962560mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45963355..45963657mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45963736..45963846mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45965211..45965321mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45966043..45968913mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45971237..45971398mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45972258..45972374mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45972440..45972534mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45972644..45972781mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45972912..45972999mRNAPaHa09g17730.1
CDS
part_ofPaHa09g17730.1-CDS-9-1787993825:45973213..45973317mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45961955..45962560mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45963355..45963657mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45963736..45963846mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45965211..45965321mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45966043..45968913mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45971237..45971398mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45972258..45972374mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45972440..45972534mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45972644..45972781mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45972912..45972999mRNAPaHa09g17730.1
exon
part_ofPaHa09g17730.1-exon-9-1787993825:45973213..45973317mRNAPaHa09g17730.1
