Feature identity
- Identifier
- PaHa09g16630.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,236 bp
- Genomic location
- 9:44,515,064–44,536,477
- Strand
- −
Hass · mRNA
PaHa09g16630.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,236
- bp
- 9:44,515,064–44,536,477
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g16630
- eggNOG
- Preferred name: IVD | Seed ortholog: 337451.A0A443PXT1 | COG: COG1960 | eggNOG OG: Acyl-CoA_dh_1@131567|AKv-18, Acyl-CoA_dh_M@131567|cW-15, Acyl-CoA_dh_N@131567|AlH-17
- Gene Ontology
- GO:0003853 short-chain 2-methyl fatty acyl-CoA dehydrogenase activity; GO:0005524 ATP binding; GO:0005739 mitochondrion; GO:0005759 mitochondrial matrix; GO:0005829 cytosol; GO:0006552 L-leucine catabolic process; GO:0008470 3-methylbutanoyl-CoA dehydrogenase activity; GO:0009083 branched-chain amino acid catabolic process; GO:0010230 alternative respiration; GO:1902190 2-methylbutanoyl-CoA(4-) catabolic process; GO:1902192 2-methylbut-2-enoyl-CoA(4-) metabolic process; GO:1902196 isovaleryl-CoA(4-) catabolic process; GO:1902198 3-methylbut-2-enoyl-CoA(4-) metabolic process
- KEGG
- EC: ec:1.3.8.4 | KO: K00253 | Pathway: 00280, 01100 | Module: M00036 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g16630.1-protein
derives_frommRNAPaHa09g16630.1
mRNAPaHa09g16630.1
part_ofgenePaHa09g16630
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44515064..44515207mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44516742..44516798mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44519842..44519896mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44519980..44520020mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44520138..44520292mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44521915..44521979mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44522074..44522124mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44524168..44524244mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44526181..44526290mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44526405..44526453mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44528130..44528174mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44528264..44528388mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44534947..44535004mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44535139..44535222mRNAPaHa09g16630.1
CDS
part_ofPaHa09g16630.1-CDS-9-1787993825:44536358..44536477mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44515064..44515207mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44516742..44516798mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44519842..44519896mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44519980..44520020mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44520138..44520292mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44521915..44521979mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44522074..44522124mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44524168..44524244mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44526181..44526290mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44526405..44526453mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44528130..44528174mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44528264..44528388mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44534947..44535004mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44535139..44535222mRNAPaHa09g16630.1
exon
part_ofPaHa09g16630.1-exon-9-1787993825:44536358..44536477mRNAPaHa09g16630.1
