Feature identity
- Identifier
- PaHa09g16390.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 531 bp
- Genomic location
- 9:44,171,118–44,175,336
- Strand
- +
Hass · mRNA
PaHa09g16390.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 531
- bp
- 9:44,171,118–44,175,336
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g16390
- eggNOG
- Preferred name: NFYB8 | Seed ortholog: 337451.A0A3S3Q0A2 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|GM-15, CBFD_NFYB_HMF@33090|Bcs-31
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process
- KEGG
- EC: ec:6.5.1.3 | KO: K08065 | Pathway: 04612, 05152, 05166 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g16390.1-protein
derives_frommRNAPaHa09g16390.1
mRNAPaHa09g16390.1
part_ofgenePaHa09g16390
CDS
part_ofPaHa09g16390.1-CDS-9-1787993825:44171118..44171341mRNAPaHa09g16390.1
CDS
part_ofPaHa09g16390.1-CDS-9-1787993825:44171433..44171562mRNAPaHa09g16390.1
CDS
part_ofPaHa09g16390.1-CDS-9-1787993825:44171710..44171715mRNAPaHa09g16390.1
CDS
part_ofPaHa09g16390.1-CDS-9-1787993825:44171812..44171889mRNAPaHa09g16390.1
CDS
part_ofPaHa09g16390.1-CDS-9-1787993825:44172031..44172081mRNAPaHa09g16390.1
CDS
part_ofPaHa09g16390.1-CDS-9-1787993825:44175295..44175336mRNAPaHa09g16390.1
exon
part_ofPaHa09g16390.1-exon-9-1787993825:44171118..44171341mRNAPaHa09g16390.1
exon
part_ofPaHa09g16390.1-exon-9-1787993825:44171433..44171562mRNAPaHa09g16390.1
exon
part_ofPaHa09g16390.1-exon-9-1787993825:44171710..44171715mRNAPaHa09g16390.1
exon
part_ofPaHa09g16390.1-exon-9-1787993825:44171812..44171889mRNAPaHa09g16390.1
exon
part_ofPaHa09g16390.1-exon-9-1787993825:44172031..44172081mRNAPaHa09g16390.1
exon
part_ofPaHa09g16390.1-exon-9-1787993825:44175295..44175336mRNAPaHa09g16390.1
