Feature identity
- Identifier
- PaHa09g14290.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,103 bp
- Genomic location
- 9:40,178,461–40,195,992
- Strand
- −
Hass · mRNA
PaHa09g14290.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,103
- bp
- 9:40,178,461–40,195,992
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g14290
- eggNOG
- Preferred name: BHLH | Seed ortholog: 337451.A0A443PX70 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|GTL-31!, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ac-9, bHLH-MYC_N@33090|r-7
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009867 jasmonic acid mediated signaling pathway; GO:0009962 regulation of flavonoid biosynthetic process; GO:0010026 trichome differentiation; GO:0010214 seed coat development; GO:0031542 positive regulation of anthocyanin biosynthetic process; GO:0045893 positive regulation of DNA-templated transcription; GO:0048316 seed development; GO:2000029 regulation of proanthocyanidin biosynthetic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g14290.1-protein
derives_frommRNAPaHa09g14290.1
mRNAPaHa09g14290.1
part_ofgenePaHa09g14290
CDS
part_ofPaHa09g14290.1-CDS-9-1787993825:40178461..40178538mRNAPaHa09g14290.1
CDS
part_ofPaHa09g14290.1-CDS-9-1787993825:40178648..40179121mRNAPaHa09g14290.1
CDS
part_ofPaHa09g14290.1-CDS-9-1787993825:40179605..40180041mRNAPaHa09g14290.1
CDS
part_ofPaHa09g14290.1-CDS-9-1787993825:40180553..40181138mRNAPaHa09g14290.1
CDS
part_ofPaHa09g14290.1-CDS-9-1787993825:40181599..40181655mRNAPaHa09g14290.1
CDS
part_ofPaHa09g14290.1-CDS-9-1787993825:40181752..40181766mRNAPaHa09g14290.1
CDS
part_ofPaHa09g14290.1-CDS-9-1787993825:40182301..40182397mRNAPaHa09g14290.1
CDS
part_ofPaHa09g14290.1-CDS-9-1787993825:40194861..40195115mRNAPaHa09g14290.1
CDS
part_ofPaHa09g14290.1-CDS-9-1787993825:40195889..40195992mRNAPaHa09g14290.1
exon
part_ofPaHa09g14290.1-exon-9-1787993825:40178461..40178538mRNAPaHa09g14290.1
exon
part_ofPaHa09g14290.1-exon-9-1787993825:40178648..40179121mRNAPaHa09g14290.1
exon
part_ofPaHa09g14290.1-exon-9-1787993825:40179605..40180041mRNAPaHa09g14290.1
exon
part_ofPaHa09g14290.1-exon-9-1787993825:40180553..40181138mRNAPaHa09g14290.1
exon
part_ofPaHa09g14290.1-exon-9-1787993825:40181599..40181655mRNAPaHa09g14290.1
exon
part_ofPaHa09g14290.1-exon-9-1787993825:40181752..40181766mRNAPaHa09g14290.1
exon
part_ofPaHa09g14290.1-exon-9-1787993825:40182301..40182397mRNAPaHa09g14290.1
exon
part_ofPaHa09g14290.1-exon-9-1787993825:40194861..40195115mRNAPaHa09g14290.1
exon
part_ofPaHa09g14290.1-exon-9-1787993825:40195889..40195992mRNAPaHa09g14290.1
