West Indian T2T · polypeptide

Pa04g2134.2-protein

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

508
aa
Pa04:46,532,458–46,538,516
genomic location
Record overview

Feature identity

Identifier
Pa04g2134.2-protein
Feature type
polypeptide
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
508 aa
Genomic location
Pa04:46,532,458–46,538,516
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: SDG40 | Seed ortholog: 337451.A0A443PIB9 | COG: S | eggNOG OG: Rubis-subs-bind@131567|d-5, SET@131567|BL-7, SET@2759|AOr-18
Gene Ontology
GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0006338 chromatin remodeling; GO:0008150 biological_process; GO:0009416 response to light stimulus; GO:0009507 chloroplast; GO:0009658 chloroplast organization; GO:0009735 response to cytokinin; GO:0010027 thylakoid membrane organization; GO:0016279 protein-lysine N-methyltransferase activity; GO:0018023 peptidyl-lysine trimethylation; GO:0032755 positive regulation of interleukin-6 production; GO:0032760 positive regulation of tumor necrosis factor production; GO:0042254 ribosome biogenesis; GO:0042793 plastid transcription; GO:0042799 histone H4K20 methyltransferase activity; GO:0042800 histone H3K4 methyltransferase activity; GO:0050729 positive regulation of inflammatory response; GO:0071863 regulation of cell proliferation in bone marrow; GO:0140941 histone H4K20me methyltransferase activity; GO:0140944 histone H4K20 monomethyltransferase activity; GO:0140945 histone H3K4 monomethyltransferase activity
KEGG
EC: ec:2.1.1.127, ec:2.1.1.259, ec:2.1.1.364, ec:2.1.1.85 | KO: K00592, K05302, K07399, K19199, K27277, K27349 | BRITE: 00001, 01000, 03009, 03036, 04812
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.