Feature identity
- Identifier
- PaHa09g11970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 390 bp
- Genomic location
- 9:36,397,728–36,406,262
- Strand
- −
Hass · mRNA
PaHa09g11970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 390
- bp
- 9:36,397,728–36,406,262
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g11970
- eggNOG
- Preferred name: LOC110777267 | Seed ortholog: 337451.A0A3S3PPP2 | COG: S | eggNOG OG: TFIID-18kDa@131567|A-1*, TFIID-18kDa@2759|B-2
- Gene Ontology
- GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009793 embryo development ending in seed dormancy; GO:0009960 endosperm development; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0017025 TBP-class protein binding; GO:0048316 seed development
- KEGG
- KO: K03127 | Pathway: 03022 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g11970.1-protein
derives_frommRNAPaHa09g11970.1
mRNAPaHa09g11970.1
part_ofgenePaHa09g11970
CDS
part_ofPaHa09g11970.1-CDS-9-1787993825:36397728..36397838mRNAPaHa09g11970.1
CDS
part_ofPaHa09g11970.1-CDS-9-1787993825:36402932..36403006mRNAPaHa09g11970.1
CDS
part_ofPaHa09g11970.1-CDS-9-1787993825:36403480..36403539mRNAPaHa09g11970.1
CDS
part_ofPaHa09g11970.1-CDS-9-1787993825:36403979..36404016mRNAPaHa09g11970.1
CDS
part_ofPaHa09g11970.1-CDS-9-1787993825:36406157..36406262mRNAPaHa09g11970.1
exon
part_ofPaHa09g11970.1-exon-9-1787993825:36397728..36397838mRNAPaHa09g11970.1
exon
part_ofPaHa09g11970.1-exon-9-1787993825:36402932..36403006mRNAPaHa09g11970.1
exon
part_ofPaHa09g11970.1-exon-9-1787993825:36403480..36403539mRNAPaHa09g11970.1
exon
part_ofPaHa09g11970.1-exon-9-1787993825:36403979..36404016mRNAPaHa09g11970.1
exon
part_ofPaHa09g11970.1-exon-9-1787993825:36406157..36406262mRNAPaHa09g11970.1
