Feature identity
- Identifier
- PaHa09g11160.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 339 bp
- Genomic location
- 9:34,913,868–34,915,770
- Strand
- −
Hass · mRNA
PaHa09g11160.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 339
- bp
- 9:34,913,868–34,915,770
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g11160
- eggNOG
- Preferred name: LOC109005672 | Seed ortholog: 218851.A0A2G5EXV9 | COG: S | eggNOG OG: bZIP_1@131221|Bbi-29, bZIP_1@131567|XL-17, bZIP_1@2759|is-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010224 response to UV-B
- KEGG
- KO: K16241 | Pathway: 04712 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g11160.1-protein
derives_frommRNAPaHa09g11160.1
mRNAPaHa09g11160.1
part_ofgenePaHa09g11160
CDS
part_ofPaHa09g11160.1-CDS-9-1787993825:34913868..34913944mRNAPaHa09g11160.1
CDS
part_ofPaHa09g11160.1-CDS-9-1787993825:34914839..34914899mRNAPaHa09g11160.1
CDS
part_ofPaHa09g11160.1-CDS-9-1787993825:34915035..34915191mRNAPaHa09g11160.1
CDS
part_ofPaHa09g11160.1-CDS-9-1787993825:34915727..34915770mRNAPaHa09g11160.1
exon
part_ofPaHa09g11160.1-exon-9-1787993825:34913868..34913944mRNAPaHa09g11160.1
exon
part_ofPaHa09g11160.1-exon-9-1787993825:34914839..34914899mRNAPaHa09g11160.1
exon
part_ofPaHa09g11160.1-exon-9-1787993825:34915035..34915191mRNAPaHa09g11160.1
exon
part_ofPaHa09g11160.1-exon-9-1787993825:34915727..34915770mRNAPaHa09g11160.1
