Feature identity
- Identifier
- PaHa09g10420.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,917 bp
- Genomic location
- 9:33,244,753–33,256,153
- Strand
- +
Hass · mRNA
PaHa09g10420.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,917
- bp
- 9:33,244,753–33,256,153
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g10420
- eggNOG
- Preferred name: WRKY2 | Seed ortholog: 337451.A0A443PWC7 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Uo-17, WRKY@33090|AiE-26
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009555 pollen development; GO:0009846 pollen germination; GO:0009942 longitudinal axis specification; GO:0030010 establishment of cell polarity
- KEGG
- KO: K18835 | Pathway: 04626 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g10420.1-protein
derives_frommRNAPaHa09g10420.1
mRNAPaHa09g10420.1
part_ofgenePaHa09g10420
CDS
part_ofPaHa09g10420.1-CDS-9-1787993825:33244753..33244765mRNAPaHa09g10420.1
CDS
part_ofPaHa09g10420.1-CDS-9-1787993825:33246353..33246394mRNAPaHa09g10420.1
CDS
part_ofPaHa09g10420.1-CDS-9-1787993825:33246507..33246871mRNAPaHa09g10420.1
CDS
part_ofPaHa09g10420.1-CDS-9-1787993825:33251069..33251254mRNAPaHa09g10420.1
CDS
part_ofPaHa09g10420.1-CDS-9-1787993825:33253229..33253544mRNAPaHa09g10420.1
CDS
part_ofPaHa09g10420.1-CDS-9-1787993825:33253638..33253718mRNAPaHa09g10420.1
CDS
part_ofPaHa09g10420.1-CDS-9-1787993825:33253812..33254037mRNAPaHa09g10420.1
CDS
part_ofPaHa09g10420.1-CDS-9-1787993825:33254614..33254772mRNAPaHa09g10420.1
CDS
part_ofPaHa09g10420.1-CDS-9-1787993825:33255625..33256153mRNAPaHa09g10420.1
exon
part_ofPaHa09g10420.1-exon-9-1787993825:33244753..33244765mRNAPaHa09g10420.1
exon
part_ofPaHa09g10420.1-exon-9-1787993825:33246353..33246394mRNAPaHa09g10420.1
exon
part_ofPaHa09g10420.1-exon-9-1787993825:33246507..33246871mRNAPaHa09g10420.1
exon
part_ofPaHa09g10420.1-exon-9-1787993825:33251069..33251254mRNAPaHa09g10420.1
exon
part_ofPaHa09g10420.1-exon-9-1787993825:33253229..33253544mRNAPaHa09g10420.1
exon
part_ofPaHa09g10420.1-exon-9-1787993825:33253638..33253718mRNAPaHa09g10420.1
exon
part_ofPaHa09g10420.1-exon-9-1787993825:33253812..33254037mRNAPaHa09g10420.1
exon
part_ofPaHa09g10420.1-exon-9-1787993825:33254614..33254772mRNAPaHa09g10420.1
exon
part_ofPaHa09g10420.1-exon-9-1787993825:33255625..33256153mRNAPaHa09g10420.1
