Feature identity
- Identifier
- PaHa09g10160.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 831 bp
- Genomic location
- 9:32,401,625–32,406,618
- Strand
- +
Hass · mRNA
PaHa09g10160.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 831
- bp
- 9:32,401,625–32,406,618
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g10160
- eggNOG
- Preferred name: LOC104594358 | Seed ortholog: 337451.A0A443PWA5 | COG: S | eggNOG OG: Myb_CC_LHEQLE@131567|A-1*, Myb_CC_LHEQLE@3193|Ah-12, Myb_CC_LHEQLE@33090|X-8, Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@33090|BFG-31, Myb_DNA-binding@3398|CRT-34
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0048768 root hair cell tip growth; GO:0070273 phosphatidylinositol-4-phosphate binding; GO:1990841 promoter-specific chromatin binding
- KEGG
- EC: ec:6.3.4.5 | KO: K01940 | Pathway: 00220, 00250, 01100, 01110, 01230 | Module: M00029, M00844, M00845, M00978 | BRITE: 00001, 01000, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g10160.1-protein
derives_frommRNAPaHa09g10160.1
mRNAPaHa09g10160.1
part_ofgenePaHa09g10160
CDS
part_ofPaHa09g10160.1-CDS-9-1787993825:32401625..32401748mRNAPaHa09g10160.1
CDS
part_ofPaHa09g10160.1-CDS-9-1787993825:32403064..32403140mRNAPaHa09g10160.1
CDS
part_ofPaHa09g10160.1-CDS-9-1787993825:32403241..32403283mRNAPaHa09g10160.1
CDS
part_ofPaHa09g10160.1-CDS-9-1787993825:32403533..32403590mRNAPaHa09g10160.1
CDS
part_ofPaHa09g10160.1-CDS-9-1787993825:32404599..32404668mRNAPaHa09g10160.1
CDS
part_ofPaHa09g10160.1-CDS-9-1787993825:32406160..32406618mRNAPaHa09g10160.1
exon
part_ofPaHa09g10160.1-exon-9-1787993825:32401625..32401748mRNAPaHa09g10160.1
exon
part_ofPaHa09g10160.1-exon-9-1787993825:32403064..32403140mRNAPaHa09g10160.1
exon
part_ofPaHa09g10160.1-exon-9-1787993825:32403241..32403283mRNAPaHa09g10160.1
exon
part_ofPaHa09g10160.1-exon-9-1787993825:32403533..32403590mRNAPaHa09g10160.1
exon
part_ofPaHa09g10160.1-exon-9-1787993825:32404599..32404668mRNAPaHa09g10160.1
exon
part_ofPaHa09g10160.1-exon-9-1787993825:32406160..32406618mRNAPaHa09g10160.1
