Feature identity
- Identifier
- PaHa09g07910.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,470 bp
- Genomic location
- 9:20,718,987–20,733,999
- Strand
- −
Hass · mRNA
PaHa09g07910.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,470
- bp
- 9:20,718,987–20,733,999
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g07910
- eggNOG
- Preferred name: BIM1 | Seed ortholog: 337451.A0A3S3R5X5 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|CYB-25, HLH@33090|AAF-17, HLH@3398|BVK-22, HLH@35493|AMq-18
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0009742 brassinosteroid mediated signaling pathway; GO:0042802 identical protein binding; GO:1902448 positive regulation of shade avoidance
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g07910.1-protein
derives_frommRNAPaHa09g07910.1
mRNAPaHa09g07910.1
part_ofgenePaHa09g07910
CDS
part_ofPaHa09g07910.1-CDS-9-1787993825:20718987..20719097mRNAPaHa09g07910.1
CDS
part_ofPaHa09g07910.1-CDS-9-1787993825:20720555..20720684mRNAPaHa09g07910.1
CDS
part_ofPaHa09g07910.1-CDS-9-1787993825:20724630..20725081mRNAPaHa09g07910.1
CDS
part_ofPaHa09g07910.1-CDS-9-1787993825:20726438..20726533mRNAPaHa09g07910.1
CDS
part_ofPaHa09g07910.1-CDS-9-1787993825:20726698..20726767mRNAPaHa09g07910.1
CDS
part_ofPaHa09g07910.1-CDS-9-1787993825:20728549..20728657mRNAPaHa09g07910.1
CDS
part_ofPaHa09g07910.1-CDS-9-1787993825:20729553..20729674mRNAPaHa09g07910.1
CDS
part_ofPaHa09g07910.1-CDS-9-1787993825:20729826..20729901mRNAPaHa09g07910.1
CDS
part_ofPaHa09g07910.1-CDS-9-1787993825:20733696..20733999mRNAPaHa09g07910.1
exon
part_ofPaHa09g07910.1-exon-9-1787993825:20718987..20719097mRNAPaHa09g07910.1
exon
part_ofPaHa09g07910.1-exon-9-1787993825:20720555..20720684mRNAPaHa09g07910.1
exon
part_ofPaHa09g07910.1-exon-9-1787993825:20724630..20725081mRNAPaHa09g07910.1
exon
part_ofPaHa09g07910.1-exon-9-1787993825:20726438..20726533mRNAPaHa09g07910.1
exon
part_ofPaHa09g07910.1-exon-9-1787993825:20726698..20726767mRNAPaHa09g07910.1
exon
part_ofPaHa09g07910.1-exon-9-1787993825:20728549..20728657mRNAPaHa09g07910.1
exon
part_ofPaHa09g07910.1-exon-9-1787993825:20729553..20729674mRNAPaHa09g07910.1
exon
part_ofPaHa09g07910.1-exon-9-1787993825:20729826..20729901mRNAPaHa09g07910.1
exon
part_ofPaHa09g07910.1-exon-9-1787993825:20733696..20733999mRNAPaHa09g07910.1
