PaHa09g07740.1

Hass · mRNA

PaHa09g07740.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

318
bp
9:19,954,584–19,956,143
genomic location
Record overview

Feature identity

Identifier
PaHa09g07740.1
Feature type
mRNA
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
318 bp
Genomic location
9:19,954,584–19,956,143
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa09g07740

eggNOG
Preferred name: ARF17 | Seed ortholog: 337451.A0A3S3NSU0 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xW-20, AUX_IAA@3398|Aeu-24, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|Aa-8, Auxin_resp@3398|Dy-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqU-23, B3@33090|Id-12, B3@3398|BZk-26!
Gene Ontology
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009908 flower development
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

CDSPaHa09g07740.1-CDS-9-1787993825:19954584..19954602
part_of
CDSPaHa09g07740.1-CDS-9-1787993825:19954782..19954946
part_of
CDSPaHa09g07740.1-CDS-9-1787993825:19955069..19955159
part_of
CDSPaHa09g07740.1-CDS-9-1787993825:19956101..19956143
part_of
exonPaHa09g07740.1-exon-9-1787993825:19954584..19954602
part_of
exonPaHa09g07740.1-exon-9-1787993825:19954782..19954946
part_of
exonPaHa09g07740.1-exon-9-1787993825:19955069..19955159
part_of
exonPaHa09g07740.1-exon-9-1787993825:19956101..19956143
part_of
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