Feature identity
- Identifier
- PaHa09g07670.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,235 bp
- Genomic location
- 9:19,626,634–19,650,589
- Strand
- −
Hass · mRNA
PaHa09g07670.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,235
- bp
- 9:19,626,634–19,650,589
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g07670
- eggNOG
- Preferred name: LOC108983431 | Seed ortholog: 337451.A0A443NCS0 | COG: S | eggNOG OG: Myb_DNA-bind_7@2759|A-1
- Gene Ontology
- GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0001112 DNA-templated transcription open complex formation; GO:0001156 TFIIIC-class transcription factor complex binding; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0045945 positive regulation of transcription by RNA polymerase III; GO:0070898 RNA polymerase III preinitiation complex assembly
- KEGG
- EC: ec:5.2.1.8 | KO: K15198 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g07670.1-protein
derives_frommRNAPaHa09g07670.1
mRNAPaHa09g07670.1
part_ofgenePaHa09g07670
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19626634..19626807mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19633459..19633562mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19634164..19634308mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19635053..19635248mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19647608..19647651mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19647812..19647912mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19648012..19648411mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19648539..19648657mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19649087..19649150mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19649254..19649651mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19649729..19649795mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19649894..19650026mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19650151..19650286mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19650362..19650425mRNAPaHa09g07670.1
CDS
part_ofPaHa09g07670.1-CDS-9-1787993825:19650500..19650589mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19626634..19626807mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19633459..19633562mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19634164..19634308mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19635053..19635248mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19647608..19647651mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19647812..19647912mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19648012..19648411mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19648539..19648657mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19649087..19649150mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19649254..19649651mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19649729..19649795mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19649894..19650026mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19650151..19650286mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19650362..19650425mRNAPaHa09g07670.1
exon
part_ofPaHa09g07670.1-exon-9-1787993825:19650500..19650589mRNAPaHa09g07670.1
