PaHa09g07130.1

Record overview

Feature identity

Computational annotation

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa09g07130

eggNOG: Preferred name: LOC103704384 | Seed ortholog: 337451.A0A443N147 | COG: S | eggNOG OG: RRM_1@131567|Xz-19, RRM_1@2759|fE-20
Gene Ontology: GO:0000387 spliceosomal snRNP assembly; GO:0000388 spliceosome conformational change to release U4 (or U4atac) and U1 (or U11); GO:0000398 mRNA splicing, via spliceosome; GO:0001825 blastocyst formation; GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005681 spliceosomal complex; GO:0005684 U2-type spliceosomal complex; GO:0005686 U2 snRNP; GO:0005689 U12-type spliceosomal complex; GO:0005737 cytoplasm; GO:0006396 RNA processing; GO:0008150 biological_process; GO:0031981 nuclear lumen; GO:0034693 U11/U12 snRNP; GO:0045292 mRNA cis splicing, via spliceosome; GO:0071006 U2-type catalytic step 1 spliceosome; GO:0071011 precatalytic spliceosome; GO:0071013 catalytic step 2 spliceosome; GO:0071016 U12-type precatalytic spliceosome; GO:0071018 U12-type catalytic step 2 spliceosome; GO:0097014 ciliary plasm; GO:1903241 U2-type prespliceosome assembly
KEGG: KO: K06910, K11090, K12833, K13126 | Pathway: 03015, 03018, 03040 | BRITE: 00001, 01002, 03019, 03041