Feature identity
- Identifier
- PaHa09g05970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,109 bp
- Genomic location
- 9:13,923,763–13,930,812
- Strand
- +
Hass · mRNA
PaHa09g05970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,109
- bp
- 9:13,923,763–13,930,812
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g05970
- eggNOG
- Preferred name: FAD4 | Seed ortholog: 337451.A0A443PVR3 | COG: S | eggNOG OG: Lipid_desat@131567|A-1
- Gene Ontology
- GO:0003674 molecular_function; GO:0005575 cellular_component; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0031969 chloroplast membrane; GO:0046471 phosphatidylglycerol metabolic process; GO:0102654 palmitoyl-[glycerolipid] 3-(E)-desaturase activity
- KEGG
- EC: ec:1.14.19.43 | KO: K20417 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g05970.1-protein
derives_frommRNAPaHa09g05970.1
mRNAPaHa09g05970.1
part_ofgenePaHa09g05970
CDS
part_ofPaHa09g05970.1-CDS-9-1787993825:13923763..13923806mRNAPaHa09g05970.1
CDS
part_ofPaHa09g05970.1-CDS-9-1787993825:13924119..13924524mRNAPaHa09g05970.1
CDS
part_ofPaHa09g05970.1-CDS-9-1787993825:13925831..13925938mRNAPaHa09g05970.1
CDS
part_ofPaHa09g05970.1-CDS-9-1787993825:13926815..13927466mRNAPaHa09g05970.1
CDS
part_ofPaHa09g05970.1-CDS-9-1787993825:13927884..13927972mRNAPaHa09g05970.1
CDS
part_ofPaHa09g05970.1-CDS-9-1787993825:13930003..13930812mRNAPaHa09g05970.1
exon
part_ofPaHa09g05970.1-exon-9-1787993825:13923763..13923806mRNAPaHa09g05970.1
exon
part_ofPaHa09g05970.1-exon-9-1787993825:13924119..13924524mRNAPaHa09g05970.1
exon
part_ofPaHa09g05970.1-exon-9-1787993825:13925831..13925938mRNAPaHa09g05970.1
exon
part_ofPaHa09g05970.1-exon-9-1787993825:13926815..13927466mRNAPaHa09g05970.1
exon
part_ofPaHa09g05970.1-exon-9-1787993825:13927884..13927972mRNAPaHa09g05970.1
exon
part_ofPaHa09g05970.1-exon-9-1787993825:13930003..13930812mRNAPaHa09g05970.1
