Feature identity
- Identifier
- PaHa09g04970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 945 bp
- Genomic location
- 9:10,571,655–10,577,376
- Strand
- −
Hass · mRNA
PaHa09g04970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 945
- bp
- 9:10,571,655–10,577,376
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g04970
- eggNOG
- Preferred name: LOC103712888 | Seed ortholog: 337451.A0A3S3NUR4 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|BmW-23, HLH@33090|AbH-19, HLH@3398|DVy-27
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:1902448 positive regulation of shade avoidance; GO:2000762 regulation of phenylpropanoid metabolic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g04970.1-protein
derives_frommRNAPaHa09g04970.1
mRNAPaHa09g04970.1
part_ofgenePaHa09g04970
CDS
part_ofPaHa09g04970.1-CDS-9-1787993825:10571655..10571747mRNAPaHa09g04970.1
CDS
part_ofPaHa09g04970.1-CDS-9-1787993825:10572962..10573039mRNAPaHa09g04970.1
CDS
part_ofPaHa09g04970.1-CDS-9-1787993825:10573135..10573203mRNAPaHa09g04970.1
CDS
part_ofPaHa09g04970.1-CDS-9-1787993825:10573284..10573349mRNAPaHa09g04970.1
CDS
part_ofPaHa09g04970.1-CDS-9-1787993825:10574161..10574280mRNAPaHa09g04970.1
CDS
part_ofPaHa09g04970.1-CDS-9-1787993825:10574385..10574801mRNAPaHa09g04970.1
CDS
part_ofPaHa09g04970.1-CDS-9-1787993825:10577275..10577376mRNAPaHa09g04970.1
exon
part_ofPaHa09g04970.1-exon-9-1787993825:10571655..10571747mRNAPaHa09g04970.1
exon
part_ofPaHa09g04970.1-exon-9-1787993825:10572962..10573039mRNAPaHa09g04970.1
exon
part_ofPaHa09g04970.1-exon-9-1787993825:10573135..10573203mRNAPaHa09g04970.1
exon
part_ofPaHa09g04970.1-exon-9-1787993825:10573284..10573349mRNAPaHa09g04970.1
exon
part_ofPaHa09g04970.1-exon-9-1787993825:10574161..10574280mRNAPaHa09g04970.1
exon
part_ofPaHa09g04970.1-exon-9-1787993825:10574385..10574801mRNAPaHa09g04970.1
exon
part_ofPaHa09g04970.1-exon-9-1787993825:10577275..10577376mRNAPaHa09g04970.1
