PaHa09g04590.1

Hass · mRNA

PaHa09g04590.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,698
bp
9:9,781,250–9,787,583
genomic location
Record overview

Feature identity

Identifier
PaHa09g04590.1
Feature type
mRNA
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
1,698 bp
Genomic location
9:9,781,250–9,787,583
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa09g04590

eggNOG
Preferred name: LOC104217691 | Seed ortholog: 337451.A0A443PVJ7 | COG: S | eggNOG OG: AMP-binding_C@131567|Drk-31, AMP-binding_C@3193|TGo-46, AMP-binding_C@3398|gGS-52, AMP-binding_C@35493|Ock-43, AMP-binding|MQMKUE@131567, AMP-binding|MQMKUE@3398
Gene Ontology
GO:0005575 cellular_component; GO:0005777 peroxisome; GO:0016207 4-coumarate-CoA ligase activity; GO:0016874 ligase activity; GO:0031956 medium-chain fatty acid-CoA ligase activity; GO:1904070 ascaroside biosynthetic process
KEGG
EC: ec:6.2.1.12 | KO: K10526 | Pathway: 00592, 01100, 01110 | Module: M00113 | BRITE: 00001
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

CDSPaHa09g04590.1-CDS-9-1787993825:9781250..9781475
part_of
CDSPaHa09g04590.1-CDS-9-1787993825:9781565..9781632
part_of
CDSPaHa09g04590.1-CDS-9-1787993825:9781928..9782790
part_of
CDSPaHa09g04590.1-CDS-9-1787993825:9787043..9787583
part_of
exonPaHa09g04590.1-exon-9-1787993825:9781250..9781475
part_of
exonPaHa09g04590.1-exon-9-1787993825:9781565..9781632
part_of
exonPaHa09g04590.1-exon-9-1787993825:9781928..9782790
part_of
exonPaHa09g04590.1-exon-9-1787993825:9787043..9787583
part_of
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