Feature identity
- Identifier
- PaHa09g01140.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 942 bp
- Genomic location
- 9:2,634,750–2,639,782
- Strand
- +
Hass · mRNA
PaHa09g01140.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 942
- bp
- 9:2,634,750–2,639,782
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g01140
- eggNOG
- Preferred name: LOC116193125 | Seed ortholog: 337451.A0A3S3N8M9 | COG: COG0360 | eggNOG OG: Ribosomal_S6@131567|A-1
- Gene Ontology
- GO:0005515 protein binding; GO:0006364 rRNA processing; GO:0008380 RNA splicing; GO:0009507 chloroplast; GO:0009536 plastid; GO:0010071 root meristem specification; GO:0010082 regulation of root meristem growth; GO:0010109 regulation of photosynthesis; GO:0010468 regulation of gene expression; GO:0042793 plastid transcription; GO:0042794 plastid rRNA transcription; GO:0051644 plastid localization; GO:0080022 primary root development; GO:2000023 regulation of lateral root development; GO:2001279 regulation of unsaturated fatty acid biosynthetic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g01140.1-protein
derives_frommRNAPaHa09g01140.1
mRNAPaHa09g01140.1
part_ofgenePaHa09g01140
CDS
part_ofPaHa09g01140.1-CDS-9-1787993825:2634750..2635076mRNAPaHa09g01140.1
CDS
part_ofPaHa09g01140.1-CDS-9-1787993825:2635955..2636009mRNAPaHa09g01140.1
CDS
part_ofPaHa09g01140.1-CDS-9-1787993825:2636127..2636183mRNAPaHa09g01140.1
CDS
part_ofPaHa09g01140.1-CDS-9-1787993825:2638450..2638527mRNAPaHa09g01140.1
CDS
part_ofPaHa09g01140.1-CDS-9-1787993825:2639358..2639782mRNAPaHa09g01140.1
exon
part_ofPaHa09g01140.1-exon-9-1787993825:2634750..2635076mRNAPaHa09g01140.1
exon
part_ofPaHa09g01140.1-exon-9-1787993825:2635955..2636009mRNAPaHa09g01140.1
exon
part_ofPaHa09g01140.1-exon-9-1787993825:2636127..2636183mRNAPaHa09g01140.1
exon
part_ofPaHa09g01140.1-exon-9-1787993825:2638450..2638527mRNAPaHa09g01140.1
exon
part_ofPaHa09g01140.1-exon-9-1787993825:2639358..2639782mRNAPaHa09g01140.1
