Feature identity
- Identifier
- PaHa08g25650.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,407 bp
- Genomic location
- 8:65,065,936–65,074,015
- Strand
- −
Hass · mRNA
PaHa08g25650.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,407
- bp
- 8:65,065,936–65,074,015
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g25650
- eggNOG
- Preferred name: LOC104609423 | Seed ortholog: 337451.A0A3S3N896 | COG: S | eggNOG OG: ARID@131567|A-1*, ARID@2759|N-4, ARID@33090|EI-11, HMG_box@131567|Aj-7, HMG_box@2759|Gn-11, HMG_box@3398|AXD-21
- Gene Ontology
- GO:0000400 four-way junction DNA binding; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009846 pollen germination; GO:0009860 pollen tube growth; GO:0019760 glucosinolate metabolic process; GO:0090406 pollen tube
- KEGG
- EC: ec:2.1.1.354 | KO: K22483, K22748 | Pathway: 00310, 01100 | BRITE: 00001, 01000, 03000, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g25650.1-protein
derives_frommRNAPaHa08g25650.1
mRNAPaHa08g25650.1
part_ofgenePaHa08g25650
CDS
part_ofPaHa08g25650.1-CDS-8-1787993825:65065936..65066358mRNAPaHa08g25650.1
CDS
part_ofPaHa08g25650.1-CDS-8-1787993825:65066853..65067250mRNAPaHa08g25650.1
CDS
part_ofPaHa08g25650.1-CDS-8-1787993825:65067446..65067574mRNAPaHa08g25650.1
CDS
part_ofPaHa08g25650.1-CDS-8-1787993825:65067672..65067834mRNAPaHa08g25650.1
CDS
part_ofPaHa08g25650.1-CDS-8-1787993825:65070656..65070734mRNAPaHa08g25650.1
CDS
part_ofPaHa08g25650.1-CDS-8-1787993825:65073801..65074015mRNAPaHa08g25650.1
exon
part_ofPaHa08g25650.1-exon-8-1787993825:65065936..65066358mRNAPaHa08g25650.1
exon
part_ofPaHa08g25650.1-exon-8-1787993825:65066853..65067250mRNAPaHa08g25650.1
exon
part_ofPaHa08g25650.1-exon-8-1787993825:65067446..65067574mRNAPaHa08g25650.1
exon
part_ofPaHa08g25650.1-exon-8-1787993825:65067672..65067834mRNAPaHa08g25650.1
exon
part_ofPaHa08g25650.1-exon-8-1787993825:65070656..65070734mRNAPaHa08g25650.1
exon
part_ofPaHa08g25650.1-exon-8-1787993825:65073801..65074015mRNAPaHa08g25650.1
