Feature identity
- Identifier
- PaHa08g24200.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 555 bp
- Genomic location
- 8:63,161,060–63,165,402
- Strand
- −
Hass · mRNA
PaHa08g24200.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 555
- bp
- 8:63,161,060–63,165,402
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g24200
- eggNOG
- Preferred name: CYTB5-D | Seed ortholog: 337451.A0A443P8Q6 | COG: S | eggNOG OG: Cyt-b5@131567|OT-14, Cyt-b5@2759|dW-17
- Gene Ontology
- GO:0000325 plant-type vacuole; GO:0005515 protein binding; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0008150 biological_process; GO:0009055 electron transfer activity; GO:0009507 chloroplast; GO:0009535 chloroplast thylakoid membrane; GO:0009536 plastid; GO:0009707 chloroplast outer membrane; GO:0010319 stromule; GO:0016020 membrane; GO:0022900 electron transport chain; GO:0031966 mitochondrial membrane; GO:0042761 very long-chain fatty acid biosynthetic process; GO:0043447 alkane biosynthetic process
- KEGG
- KO: K23490 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g24200.1-protein
derives_frommRNAPaHa08g24200.1
mRNAPaHa08g24200.1
part_ofgenePaHa08g24200
CDS
part_ofPaHa08g24200.1-CDS-8-1787993825:63161060..63161299mRNAPaHa08g24200.1
CDS
part_ofPaHa08g24200.1-CDS-8-1787993825:63163077..63163126mRNAPaHa08g24200.1
CDS
part_ofPaHa08g24200.1-CDS-8-1787993825:63163254..63163367mRNAPaHa08g24200.1
CDS
part_ofPaHa08g24200.1-CDS-8-1787993825:63164336..63164402mRNAPaHa08g24200.1
CDS
part_ofPaHa08g24200.1-CDS-8-1787993825:63165319..63165402mRNAPaHa08g24200.1
exon
part_ofPaHa08g24200.1-exon-8-1787993825:63161060..63161299mRNAPaHa08g24200.1
exon
part_ofPaHa08g24200.1-exon-8-1787993825:63163077..63163126mRNAPaHa08g24200.1
exon
part_ofPaHa08g24200.1-exon-8-1787993825:63163254..63163367mRNAPaHa08g24200.1
exon
part_ofPaHa08g24200.1-exon-8-1787993825:63164336..63164402mRNAPaHa08g24200.1
exon
part_ofPaHa08g24200.1-exon-8-1787993825:63165319..63165402mRNAPaHa08g24200.1
