Feature identity
- Identifier
- PaHa08g22960.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 978 bp
- Genomic location
- 8:60,574,068–60,583,639
- Strand
- −
Hass · mRNA
PaHa08g22960.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 978
- bp
- 8:60,574,068–60,583,639
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g22960
- eggNOG
- Preferred name: HAP5A | Seed ortholog: 337451.A0A3S3PB62 | eggNOG OG: Histone@131567|B-2, Histone@33090|DW-12
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0016602 CCAAT-binding factor complex; GO:0045893 positive regulation of DNA-templated transcription; GO:2000306 positive regulation of photomorphogenesis
- KEGG
- EC: ec:2.7.7.7 | KO: K08066 | Pathway: 03030, 03410, 03420, 04612, 05152 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g22960.1-protein
derives_frommRNAPaHa08g22960.1
mRNAPaHa08g22960.1
part_ofgenePaHa08g22960
CDS
part_ofPaHa08g22960.1-CDS-8-1787993825:60574068..60574190mRNAPaHa08g22960.1
CDS
part_ofPaHa08g22960.1-CDS-8-1787993825:60574321..60574532mRNAPaHa08g22960.1
CDS
part_ofPaHa08g22960.1-CDS-8-1787993825:60582997..60583639mRNAPaHa08g22960.1
exon
part_ofPaHa08g22960.1-exon-8-1787993825:60574068..60574190mRNAPaHa08g22960.1
exon
part_ofPaHa08g22960.1-exon-8-1787993825:60574321..60574532mRNAPaHa08g22960.1
exon
part_ofPaHa08g22960.1-exon-8-1787993825:60582997..60583639mRNAPaHa08g22960.1
