Feature identity
- Identifier
- PaHa08g20550.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,788 bp
- Genomic location
- 8:56,338,852–56,347,491
- Strand
- +
Hass · mRNA
PaHa08g20550.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,788
- bp
- 8:56,338,852–56,347,491
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g20550
- eggNOG
- Preferred name: SKU5 | Seed ortholog: 337451.A0A443P7W7 | COG: COG2132 | eggNOG OG: Cu-oxidase@131567|A-1, Cu-oxidase@2759|v-6, Cu-oxidase@3193|ALW-18, Cu-oxidase@3398|Crh-24, Cu-oxidase@35493|Kt-12, Cu-oxidase_2@2759|B-2!, Cu-oxidase_2@3193|EN-11, Cu-oxidase_2@3398|gF-18, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@3193|Wu-16, Cu-oxidase_3@3398|BNy-23, Cu-oxidase_3@58023|lm-18
- Gene Ontology
- GO:0004097 catechol oxidase activity; GO:0004322 ferroxidase activity; GO:0004503 tyrosinase activity; GO:0005576 extracellular region; GO:0008447 L-ascorbate oxidase activity; GO:0009506 plasmodesma; GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0040003 chitin-based cuticle development; GO:0055070 copper ion homeostasis; GO:0098711 iron ion import across plasma membrane
- KEGG
- EC: ec:1.10.3.2, ec:1.10.3.3 | KO: K00423, K05909 | Pathway: 00053, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g20550.1-protein
derives_frommRNAPaHa08g20550.1
mRNAPaHa08g20550.1
part_ofgenePaHa08g20550
CDS
part_ofPaHa08g20550.1-CDS-8-1787993825:56338852..56339001mRNAPaHa08g20550.1
CDS
part_ofPaHa08g20550.1-CDS-8-1787993825:56342833..56342942mRNAPaHa08g20550.1
CDS
part_ofPaHa08g20550.1-CDS-8-1787993825:56343030..56343300mRNAPaHa08g20550.1
CDS
part_ofPaHa08g20550.1-CDS-8-1787993825:56343387..56343525mRNAPaHa08g20550.1
CDS
part_ofPaHa08g20550.1-CDS-8-1787993825:56343721..56344087mRNAPaHa08g20550.1
CDS
part_ofPaHa08g20550.1-CDS-8-1787993825:56344264..56344629mRNAPaHa08g20550.1
CDS
part_ofPaHa08g20550.1-CDS-8-1787993825:56344739..56344817mRNAPaHa08g20550.1
CDS
part_ofPaHa08g20550.1-CDS-8-1787993825:56347107..56347306mRNAPaHa08g20550.1
CDS
part_ofPaHa08g20550.1-CDS-8-1787993825:56347386..56347491mRNAPaHa08g20550.1
exon
part_ofPaHa08g20550.1-exon-8-1787993825:56338852..56339001mRNAPaHa08g20550.1
exon
part_ofPaHa08g20550.1-exon-8-1787993825:56342833..56342942mRNAPaHa08g20550.1
exon
part_ofPaHa08g20550.1-exon-8-1787993825:56343030..56343300mRNAPaHa08g20550.1
exon
part_ofPaHa08g20550.1-exon-8-1787993825:56343387..56343525mRNAPaHa08g20550.1
exon
part_ofPaHa08g20550.1-exon-8-1787993825:56343721..56344087mRNAPaHa08g20550.1
exon
part_ofPaHa08g20550.1-exon-8-1787993825:56344264..56344629mRNAPaHa08g20550.1
exon
part_ofPaHa08g20550.1-exon-8-1787993825:56344739..56344817mRNAPaHa08g20550.1
exon
part_ofPaHa08g20550.1-exon-8-1787993825:56347107..56347306mRNAPaHa08g20550.1
exon
part_ofPaHa08g20550.1-exon-8-1787993825:56347386..56347491mRNAPaHa08g20550.1
