Feature identity
- Identifier
- PaHa08g20040.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,053 bp
- Genomic location
- 8:55,585,254–55,590,113
- Strand
- +
Hass · mRNA
PaHa08g20040.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,053
- bp
- 8:55,585,254–55,590,113
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g20040
- eggNOG
- Preferred name: KAN2 | Seed ortholog: 337451.A0A443P7Q7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@1437183|JmK-43, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|App-30, Myb_DNA-binding@33090|Adt-29, Myb_DNA-binding@3398|DZh-36, Myb_DNA-binding@58023|Bsd-33
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0048440 carpel development; GO:0048481 plant ovule development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g20040.1-protein
derives_frommRNAPaHa08g20040.1
mRNAPaHa08g20040.1
part_ofgenePaHa08g20040
CDS
part_ofPaHa08g20040.1-CDS-8-1787993825:55585254..55585839mRNAPaHa08g20040.1
CDS
part_ofPaHa08g20040.1-CDS-8-1787993825:55585948..55586024mRNAPaHa08g20040.1
CDS
part_ofPaHa08g20040.1-CDS-8-1787993825:55586952..55586997mRNAPaHa08g20040.1
CDS
part_ofPaHa08g20040.1-CDS-8-1787993825:55587101..55587260mRNAPaHa08g20040.1
CDS
part_ofPaHa08g20040.1-CDS-8-1787993825:55589265..55589328mRNAPaHa08g20040.1
CDS
part_ofPaHa08g20040.1-CDS-8-1787993825:55589994..55590113mRNAPaHa08g20040.1
exon
part_ofPaHa08g20040.1-exon-8-1787993825:55585254..55585839mRNAPaHa08g20040.1
exon
part_ofPaHa08g20040.1-exon-8-1787993825:55585948..55586024mRNAPaHa08g20040.1
exon
part_ofPaHa08g20040.1-exon-8-1787993825:55586952..55586997mRNAPaHa08g20040.1
exon
part_ofPaHa08g20040.1-exon-8-1787993825:55587101..55587260mRNAPaHa08g20040.1
exon
part_ofPaHa08g20040.1-exon-8-1787993825:55589265..55589328mRNAPaHa08g20040.1
exon
part_ofPaHa08g20040.1-exon-8-1787993825:55589994..55590113mRNAPaHa08g20040.1
