Feature identity
- Identifier
- PaHa08g19630.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 750 bp
- Genomic location
- 8:55,036,841–55,042,442
- Strand
- −
Hass · mRNA
PaHa08g19630.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 750
- bp
- 8:55,036,841–55,042,442
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g19630
- eggNOG
- Preferred name: BI-1 | Seed ortholog: 337451.A0A443P7M6 | COG: S | eggNOG OG: Bax1-I@131567|B-2, Bax1-I@2759|I-4
- Gene Ontology
- GO:0000038 very long-chain fatty acid metabolic process; GO:0005515 protein binding; GO:0005635 nuclear envelope; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005886 plasma membrane; GO:0006983 ER overload response; GO:0009414 response to water deprivation; GO:0042761 very long-chain fatty acid biosynthetic process; GO:0043069 negative regulation of programmed cell death; GO:0140506 endoplasmic reticulum-autophagosome adaptor activity
- KEGG
- KO: K21889 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g19630.1-protein
derives_frommRNAPaHa08g19630.1
mRNAPaHa08g19630.1
part_ofgenePaHa08g19630
CDS
part_ofPaHa08g19630.1-CDS-8-1787993825:55036841..55036894mRNAPaHa08g19630.1
CDS
part_ofPaHa08g19630.1-CDS-8-1787993825:55037005..55037160mRNAPaHa08g19630.1
CDS
part_ofPaHa08g19630.1-CDS-8-1787993825:55038724..55038910mRNAPaHa08g19630.1
CDS
part_ofPaHa08g19630.1-CDS-8-1787993825:55041622..55041713mRNAPaHa08g19630.1
CDS
part_ofPaHa08g19630.1-CDS-8-1787993825:55041826..55041969mRNAPaHa08g19630.1
CDS
part_ofPaHa08g19630.1-CDS-8-1787993825:55042326..55042442mRNAPaHa08g19630.1
exon
part_ofPaHa08g19630.1-exon-8-1787993825:55036841..55036894mRNAPaHa08g19630.1
exon
part_ofPaHa08g19630.1-exon-8-1787993825:55037005..55037160mRNAPaHa08g19630.1
exon
part_ofPaHa08g19630.1-exon-8-1787993825:55038724..55038910mRNAPaHa08g19630.1
exon
part_ofPaHa08g19630.1-exon-8-1787993825:55041622..55041713mRNAPaHa08g19630.1
exon
part_ofPaHa08g19630.1-exon-8-1787993825:55041826..55041969mRNAPaHa08g19630.1
exon
part_ofPaHa08g19630.1-exon-8-1787993825:55042326..55042442mRNAPaHa08g19630.1
