PaHa08g19620.1

Hass · mRNA

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,828: bp
8:55,017,907–55,034,399: genomic location

Record overview

Feature identity

Identifier: PaHa08g19620.1
Feature type: mRNA
Genome collection: Hass
Organism: Persea americana-Hass
Sequence length: 3,828 bp
Genomic location: 8:55,017,907–55,034,399
Strand: +

Open original Tripal record

Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa08g19620

eggNOG: Preferred name: GATA26 | Seed ortholog: 337451.A0A3S3NFT4 | COG: S | eggNOG OG: ASXH@2759|A-1, GATA@131567|A-1*, GATA@2759|Cp-10
Gene Ontology: GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000902 cell morphogenesis; GO:0000976 transcription cis-regulatory region binding; GO:0001709 cell fate determination; GO:0003007 heart morphogenesis; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006338 chromatin remodeling; GO:0006355 regulation of DNA-templated transcription; GO:0006357 regulation of transcription by RNA polymerase II; GO:0007469 antennal development; GO:0007475 apposition of dorsal and ventral imaginal disc-derived wing surfaces; GO:0007507 heart development; GO:0007512 adult heart development; GO:0007623 circadian rhythm; GO:0009416 response to light stimulus; GO:0009845 seed germination; GO:0009887 animal organ morphogenesis; GO:0009948 anterior/posterior axis specification; GO:0010468 regulation of gene expression; GO:0010888 negative regulation of lipid storage; GO:0030097 hemopoiesis; GO:0030447 filamentous growth; GO:0032526 response to retinoic acid; GO:0033696 heterochromatin boundary formation; GO:0034605 cellular response to heat; GO:0035186 syncytial blastoderm mitotic cell cycle; GO:0035359 negative regulation of peroxisome proliferator activated receptor signaling pathway; GO:0035360 positive regulation of peroxisome proliferator activated receptor signaling pathway; GO:0035564 regulation of kidney size; GO:0040029 epigenetic regulation of gene expression; GO:0045498 sex comb development; GO:0045599 negative regulation of fat cell differentiation; GO:0045600 positive regulation of fat cell differentiation; GO:0045658 regulation of neutrophil differentiation; GO:0045672 positive regulation of osteoclast differentiation; GO:0045815 transcription initiation-coupled chromatin remodeling; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048386 positive regulation of retinoic acid receptor signaling pathway; GO:0048534 hematopoietic or lymphoid organ development; GO:0048538 thymus development; GO:0048539 bone marrow development; GO:0048704 embryonic skeletal system morphogenesis; GO:0048872 homeostasis of number of cells; GO:0051055 negative regulation of lipid biosynthetic process; GO:0060348 bone development; GO:0060430 lung saccule development; GO:0061516 monocyte proliferation; GO:0071280 cellular response to copper ion; GO:0071285 cellular response to lithium ion; GO:0071466 cellular response to xenobiotic stimulus; GO:0072015 podocyte development; GO:1900159 positive regulation of bone mineralization involved in bone maturation; GO:1905177 tracheary element differentiation
KEGG: KO: K09184, K11471, K11648, K11770, K14972, K23407 | Pathway: 03082, 03083, 03250 | BRITE: 00001, 01009, 03000, 03021, 03036

Biological context