Feature identity
- Identifier
- PaHa08g19040.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 795 bp
- Genomic location
- 8:53,591,133–53,596,809
- Strand
- +
Hass · mRNA
PaHa08g19040.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 795
- bp
- 8:53,591,133–53,596,809
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g19040
- eggNOG
- Preferred name: FUS3 | Seed ortholog: 4432.A0A1U7ZD38 | COG: S | eggNOG OG: B3@131567|A-1*, B3@1437183|Cee-31, B3@33090|AIM-20, B3@3398|Bxf-28, B3@58023|Bmr-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin; GO:0009789 positive regulation of abscisic acid-activated signaling pathway; GO:0009793 embryo development ending in seed dormancy; GO:0010116 positive regulation of abscisic acid biosynthetic process; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0010262 somatic embryogenesis; GO:0010373 negative regulation of gibberellin biosynthetic process; GO:0019900 kinase binding; GO:0045995 regulation of embryonic development; GO:0048573 photoperiodism, flowering; GO:0099402 plant organ development
- KEGG
- KO: K09287 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g19040.1-protein
derives_frommRNAPaHa08g19040.1
mRNAPaHa08g19040.1
part_ofgenePaHa08g19040
CDS
part_ofPaHa08g19040.1-CDS-8-1787993825:53591133..53591306mRNAPaHa08g19040.1
CDS
part_ofPaHa08g19040.1-CDS-8-1787993825:53594888..53594977mRNAPaHa08g19040.1
CDS
part_ofPaHa08g19040.1-CDS-8-1787993825:53595107..53595207mRNAPaHa08g19040.1
CDS
part_ofPaHa08g19040.1-CDS-8-1787993825:53595937..53595983mRNAPaHa08g19040.1
CDS
part_ofPaHa08g19040.1-CDS-8-1787993825:53596310..53596386mRNAPaHa08g19040.1
CDS
part_ofPaHa08g19040.1-CDS-8-1787993825:53596504..53596809mRNAPaHa08g19040.1
exon
part_ofPaHa08g19040.1-exon-8-1787993825:53591133..53591306mRNAPaHa08g19040.1
exon
part_ofPaHa08g19040.1-exon-8-1787993825:53594888..53594977mRNAPaHa08g19040.1
exon
part_ofPaHa08g19040.1-exon-8-1787993825:53595107..53595207mRNAPaHa08g19040.1
exon
part_ofPaHa08g19040.1-exon-8-1787993825:53595937..53595983mRNAPaHa08g19040.1
exon
part_ofPaHa08g19040.1-exon-8-1787993825:53596310..53596386mRNAPaHa08g19040.1
exon
part_ofPaHa08g19040.1-exon-8-1787993825:53596504..53596809mRNAPaHa08g19040.1
