Feature identity
- Identifier
- PaHa08g18930.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,968 bp
- Genomic location
- 8:53,356,494–53,396,204
- Strand
- −
Hass · mRNA
PaHa08g18930.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,968
- bp
- 8:53,356,494–53,396,204
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g18930
- eggNOG
- Preferred name: LOC101757671 | Seed ortholog: 337451.A0A3S3PAL2 | COG: S | eggNOG OG: VEFS-Box@2759|A-1, VEFS-Box@3193|Kk-18
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0001222 transcription corepressor binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005677 chromatin silencing complex; GO:0009908 flower development; GO:0031507 heterochromatin formation; GO:0031519 PcG protein complex; GO:0048586 regulation of long-day photoperiodism, flowering
- KEGG
- KO: K11463 | Pathway: 03083 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g18930.1-protein
derives_frommRNAPaHa08g18930.1
mRNAPaHa08g18930.1
part_ofgenePaHa08g18930
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53356494..53356614mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53357557..53357646mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53358567..53358646mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53359135..53359218mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53372878..53372926mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53376613..53376659mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53376756..53376910mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53377084..53377220mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53377332..53377378mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53381201..53381260mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53381357..53381410mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53381612..53381664mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53383546..53383610mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53387836..53387957mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53388097..53388159mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53389402..53389541mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53392184..53392252mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53392336..53392492mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53392620..53392734mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53393409..53393464mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53393673..53393841mRNAPaHa08g18930.1
CDS
part_ofPaHa08g18930.1-CDS-8-1787993825:53396170..53396204mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53356494..53356614mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53357557..53357646mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53358567..53358646mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53359135..53359218mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53372878..53372926mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53376613..53376659mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53376756..53376910mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53377084..53377220mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53377332..53377378mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53381201..53381260mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53381357..53381410mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53381612..53381664mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53383546..53383610mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53387836..53387957mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53388097..53388159mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53389402..53389541mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53392184..53392252mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53392336..53392492mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53392620..53392734mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53393409..53393464mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53393673..53393841mRNAPaHa08g18930.1
exon
part_ofPaHa08g18930.1-exon-8-1787993825:53396170..53396204mRNAPaHa08g18930.1
