Feature identity
- Identifier
- PaHa08g18490.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,248 bp
- Genomic location
- 8:52,712,871–52,716,181
- Strand
- +
Hass · mRNA
PaHa08g18490.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,248
- bp
- 8:52,712,871–52,716,181
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g18490
- eggNOG
- Preferred name: ASIL2 | Seed ortholog: 337451.A0A3S3NUA1 | COG: S | eggNOG OG: Myb_DNA-bind_4@131567|c-5, Myb_DNA-bind_4@2759|AT-7, Myb_DNA-bind_4@3193|wu-18, Myb_DNA-bind_4@35493|Px-14, Myb_DNA-bind_4@58023|AuU-22
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0043565 sequence-specific DNA binding
- KEGG
- EC: ec:3.1.3.48 | KO: K18045 | Pathway: 05168 | BRITE: 00001, 01000, 01009
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g18490.1-protein
derives_frommRNAPaHa08g18490.1
mRNAPaHa08g18490.1
part_ofgenePaHa08g18490
CDS
part_ofPaHa08g18490.1-CDS-8-1787993825:52712871..52713969mRNAPaHa08g18490.1
CDS
part_ofPaHa08g18490.1-CDS-8-1787993825:52716033..52716181mRNAPaHa08g18490.1
exon
part_ofPaHa08g18490.1-exon-8-1787993825:52712871..52713969mRNAPaHa08g18490.1
exon
part_ofPaHa08g18490.1-exon-8-1787993825:52716033..52716181mRNAPaHa08g18490.1
