Feature identity
- Identifier
- PaHa08g18110.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,071 bp
- Genomic location
- 8:52,152,078–52,171,981
- Strand
- +
Hass · mRNA
PaHa08g18110.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,071
- bp
- 8:52,152,078–52,171,981
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g18110
- eggNOG
- Preferred name: ESC | Seed ortholog: 337451.A0A3S3N766 | COG: S | eggNOG OG: PCC@131567|A-1, PCC@1437183|Alt-26!, PCC@33090|AUd-23
- Gene Ontology
- GO:0003677 DNA binding; GO:0003680 minor groove of adenine-thymine-rich DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005694 chromosome; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0043565 sequence-specific DNA binding; GO:0098687 chromosomal region
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g18110.1-protein
derives_frommRNAPaHa08g18110.1
mRNAPaHa08g18110.1
part_ofgenePaHa08g18110
CDS
part_ofPaHa08g18110.1-CDS-8-1787993825:52152078..52152507mRNAPaHa08g18110.1
CDS
part_ofPaHa08g18110.1-CDS-8-1787993825:52154134..52154201mRNAPaHa08g18110.1
CDS
part_ofPaHa08g18110.1-CDS-8-1787993825:52162474..52162605mRNAPaHa08g18110.1
CDS
part_ofPaHa08g18110.1-CDS-8-1787993825:52165726..52165887mRNAPaHa08g18110.1
CDS
part_ofPaHa08g18110.1-CDS-8-1787993825:52171703..52171981mRNAPaHa08g18110.1
exon
part_ofPaHa08g18110.1-exon-8-1787993825:52152078..52152507mRNAPaHa08g18110.1
exon
part_ofPaHa08g18110.1-exon-8-1787993825:52154134..52154201mRNAPaHa08g18110.1
exon
part_ofPaHa08g18110.1-exon-8-1787993825:52162474..52162605mRNAPaHa08g18110.1
exon
part_ofPaHa08g18110.1-exon-8-1787993825:52165726..52165887mRNAPaHa08g18110.1
exon
part_ofPaHa08g18110.1-exon-8-1787993825:52171703..52171981mRNAPaHa08g18110.1
