Feature identity
- Identifier
- Pa09g2215.1-protein
- Feature type
- polypeptide
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 289 aa
- Genomic location
- Pa09:47,719,698–47,725,556
- Strand
- +
West Indian T2T · polypeptide
Pa09g2215.1-protein
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 289
- aa
- Pa09:47,719,698–47,725,556
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa09g2215
- eggNOG
- Preferred name: LOC104609404 | Seed ortholog: 337451.A0A3S3PQV2 | COG: S | eggNOG OG: TFA2_Winged_2@2759|A-1, TFIIE_beta@2759|A-1
- Gene Ontology
- GO:0000993 RNA polymerase II complex binding; GO:0001097 TFIIH-class transcription factor complex binding; GO:0003697 single-stranded DNA binding; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005669 transcription factor TFIID complex; GO:0005673 transcription factor TFIIE complex; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0008150 biological_process; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0042789 mRNA transcription by RNA polymerase II; GO:0051123 RNA polymerase II preinitiation complex assembly; GO:0097550 transcription preinitiation complex
- KEGG
- KO: K03137 | Pathway: 03022 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa09g2215.1-protein
derives_frommRNAPa09g2215.1
