Feature identity
- Identifier
- PaHa08g16110.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 4,110 bp
- Genomic location
- 8:48,657,969–48,689,313
- Strand
- +
Hass · mRNA
PaHa08g16110.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,110
- bp
- 8:48,657,969–48,689,313
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g16110
- eggNOG
- Preferred name: MED15A | Seed ortholog: 337451.A0A3S3N1I4 | eggNOG OG: KIX_2@131567|C-2, KIX_2@3193|Eg-11, KIX_2@58023|GS-12
- Gene Ontology
- GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009751 response to salicylic acid; GO:0016592 mediator complex; GO:0031490 chromatin DNA binding; GO:0045723 positive regulation of fatty acid biosynthetic process
- KEGG
- EC: ec:2.3.1.48, ec:2.7.11.22 | KO: K14972 | Pathway: 03083, 03250 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g16110.1-protein
derives_frommRNAPaHa08g16110.1
mRNAPaHa08g16110.1
part_ofgenePaHa08g16110
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48657969..48658160mRNAPaHa08g16110.1
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48663523..48663640mRNAPaHa08g16110.1
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48664233..48665576mRNAPaHa08g16110.1
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48672237..48672307mRNAPaHa08g16110.1
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48680298..48680372mRNAPaHa08g16110.1
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48680870..48682348mRNAPaHa08g16110.1
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48683883..48684227mRNAPaHa08g16110.1
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48684534..48684725mRNAPaHa08g16110.1
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48684816..48684904mRNAPaHa08g16110.1
CDS
part_ofPaHa08g16110.1-CDS-8-1787993825:48689109..48689313mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48657969..48658160mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48663523..48663640mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48664233..48665576mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48672237..48672307mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48680298..48680372mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48680870..48682348mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48683883..48684227mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48684534..48684725mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48684816..48684904mRNAPaHa08g16110.1
exon
part_ofPaHa08g16110.1-exon-8-1787993825:48689109..48689313mRNAPaHa08g16110.1
